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[samtools.git] / bam.h
2012-09-12 Petr DanecekMerge remote branch 'remotes/pd3/master' blob | commitdiff | raw
2012-08-03 Heng Lir580: bugfix - bam_aux_get() error given 'f' type blob | commitdiff | raw
2012-06-21 Petr DanecekMerge branch 'master' of github.com:samtools/samtools blob | commitdiff | raw | diff to current
2012-06-19 Heng Lir579: after merging Peter's depad changes blob | commitdiff | raw | diff to current
2012-06-12 Petr DanecekMerge remote branch 'rq/getopt_mac' blob | commitdiff | raw | diff to current
2012-06-07 kortschakUpdate bam1_core_t and bam1_t documentation blob | commitdiff | raw | diff to current
2012-05-18 Petr DanecekMerge branch 'master' of github.com:samtools/samtools blob | commitdiff | raw | diff to current
2012-05-17 Heng Liadded bamshuf from htslib blob | commitdiff | raw | diff to current
2012-04-23 Petr DanecekResolved merge conflict blob | commitdiff | raw | diff to current
2012-04-17 Heng Lir572: added "bedcov" command blob | commitdiff | raw | diff to current
2012-04-04 Petr DanecekMerge remote branch 'main/master' blob | commitdiff | raw | diff to current
2012-03-30 Heng Lishrink bam1_t::m_data when sorting blob | commitdiff | raw | diff to current
2012-02-16 Heng Libugfix: wrong SP; missing DV in the VCF header blob | commitdiff | raw | diff to current
2012-02-08 Heng Lichanges from git blob | commitdiff | raw | diff to current
2011-09-23 Heng Liconverted padded SAM to unpadded SAM blob | commitdiff | raw | diff to current
2011-09-02 Heng Li * Updated samtools to the latest blob | commitdiff | raw | diff to current
2011-07-07 Heng LiRelease samtools-0.1.17 blob | commitdiff | raw | diff to current
2011-06-03 Heng Li * 0.1.16-dev (r969:252) blob | commitdiff | raw | diff to current
2011-04-22 Heng LiRelease samtools-0.1.16 (r963:234) blob | commitdiff | raw | diff to current
2011-04-18 Heng LiAdded the support for the new SAM/BAM type "B" blob | commitdiff | raw | diff to current
2011-04-10 Heng LiRelease samtools-0.1.15 (r949:203) blob | commitdiff | raw | diff to current
2011-04-08 Heng Li * added bam_verbose global variable blob | commitdiff | raw | diff to current
2011-03-30 Heng Li * added BED support to samtools view and mpileup and... blob | commitdiff | raw | diff to current
2011-03-22 Heng LiRelease samtools-0.1.14 (r933:170) blob | commitdiff | raw | diff to current
2011-03-18 Heng Li * allow to change the compression level in BAM output blob | commitdiff | raw | diff to current
2011-03-01 Heng LiRelease samtools-0.1.13 (r926:134) blob | commitdiff | raw | diff to current
2011-03-01 Heng Li * optionally drop phase ambiguous reads blob | commitdiff | raw | diff to current
2011-02-28 Heng Li * 0.1.12-r924:126 blob | commitdiff | raw | diff to current
2011-02-28 Heng Li * put version number in bam.h blob | commitdiff | raw | diff to current
2010-11-08 Heng Liprepare for the indel caller. It is not ready yet. blob | commitdiff | raw | diff to current
2010-10-30 Heng Li * samtools-0.1.9-2 (r787) blob | commitdiff | raw | diff to current
2010-10-27 Heng Li * samtools-0.1.8-21 (r780) blob | commitdiff | raw | diff to current
2010-10-27 Heng Li * samtools-0.1.8-20 (r778) blob | commitdiff | raw | diff to current
2010-09-24 On behalf of John... Add bam_validate1(). blob | commitdiff | raw | diff to current
2010-09-20 Heng Li * merge files region-by-region. work on small examples... blob | commitdiff | raw | diff to current
2010-07-02 Heng Lifixed a minor bug in idxstats blob | commitdiff | raw | diff to current
2010-06-12 Heng Lirename iterf as iter blob | commitdiff | raw | diff to current
2010-06-12 Heng Li * samtools-0.1.7-14 (r591) blob | commitdiff | raw | diff to current
2010-06-12 Heng Li * samtools-0.1.7-13 (r590) blob | commitdiff | raw | diff to current
2010-06-12 Heng Li * samtools-0.1.7-12 (r589) blob | commitdiff | raw | diff to current
2010-06-11 Heng Li * samtools-0.1.7-10 (r587) blob | commitdiff | raw | diff to current
2010-02-26 Petr DanecekImproved efficiency of header parsing blob | commitdiff | raw | diff to current
2009-10-24 Heng Li * BUGGY VERSION blob | commitdiff | raw | diff to current
2009-10-24 Heng Li * This revision is SERIOUSLY BUGGY. Please NOT use it. blob | commitdiff | raw | diff to current
2009-10-19 Heng Li * samtools-0.1.6-15 (r482) blob | commitdiff | raw | diff to current
2009-10-14 Heng Li * samtools-0.1.6-12 (r478) blob | commitdiff | raw | diff to current
2009-10-08 Heng LiUnfinished modification. Please do not use this revision... blob | commitdiff | raw | diff to current
2009-07-24 Heng Li * samtools-0.1.5-17 (r416) blob | commitdiff | raw | diff to current
2009-07-24 Heng Li * samtools-0.1.5-12 (r415) blob | commitdiff | raw | diff to current
2009-07-17 Heng Li * samtools-0.1.5-10 (r407) blob | commitdiff | raw | diff to current
2009-07-13 Heng Li * samtools-0.1.5-5 (r395) blob | commitdiff | raw | diff to current
2009-07-09 Heng Li * samtools-0.1.5-1 (r390) blob | commitdiff | raw | diff to current
2009-07-07 Heng LiRelease samtools-0.1.5a (for compatibility with Bio... blob | commitdiff | raw | diff to current
2009-07-02 Heng Li * samtools-0.1.4-21 (r368) blob | commitdiff | raw | diff to current
2009-06-13 Heng Li * samtools-0.1.4-10 (r341) blob | commitdiff | raw | diff to current
2009-06-12 Heng Li * samtools-0.1.4-8 (r338) blob | commitdiff | raw | diff to current
2009-06-12 Heng Li * samtools-0.1.4-6 (r334) blob | commitdiff | raw | diff to current
2009-05-14 Heng Li * samtools-0.1.3-21 (286) blob | commitdiff | raw | diff to current
2009-05-13 Heng Li * samtools-0.1.3-20 (r276) blob | commitdiff | raw | diff to current
2009-05-12 Heng Li * samtools-0.1.3-19 (r275) blob | commitdiff | raw | diff to current
2009-05-05 Heng Li * samtools-0.1.3-14 (r262) blob | commitdiff | raw | diff to current
2009-05-05 Heng Li * samtools-0.1.3-12 (r259) blob | commitdiff | raw | diff to current
2009-05-05 Heng Li * samtools-0.1.3-11 (r258) blob | commitdiff | raw | diff to current
2009-04-28 Heng Li * samtools-0.1.3-7 (r246) blob | commitdiff | raw | diff to current
2009-04-24 Heng Li * samtools-0.1.3-5 (r243) blob | commitdiff | raw | diff to current
2009-04-24 Heng Li * samtools-0.1.3-3 (r240) blob | commitdiff | raw | diff to current
2009-04-24 Heng Li * samtools-0.1.3-2 (r239) blob | commitdiff | raw | diff to current
2009-01-22 Heng Li * Merge from branches/dev/ blob | commitdiff | raw | diff to current
2008-12-22 Heng LiCreate trunk copy blob | commitdiff | raw | diff to current
Mirror of samtools with my branches