From: Heng Li <lh3@live.co.uk>
Date: Mon, 17 Aug 2009 08:33:17 +0000 (+0000)
Subject:  *
X-Git-Url: https://git.donarmstrong.com/?p=samtools.git;a=commitdiff_plain;h=c92c84dba4871d9eb21cb8ea83dbcb9e0d0f95b9

 *
---

diff --git a/bam_aux.c b/bam_aux.c
index 894ae62..6a82d9a 100644
--- a/bam_aux.c
+++ b/bam_aux.c
@@ -28,7 +28,7 @@ uint8_t *bam_aux_get_core(bam1_t *b, const char tag[2])
 #define __skip_tag(s) do { \
 		int type = toupper(*(s));										\
 		++(s);															\
-		if (type == 'C') ++(s);											\
+		if (type == 'C' || type == 'A') ++(s);							\
 		else if (type == 'S') (s) += 2;									\
 		else if (type == 'I' || type == 'F') (s) += 4;					\
 		else if (type == 'D') (s) += 8;									\
@@ -42,6 +42,7 @@ uint8_t *bam_aux_get(const bam1_t *b, const char tag[2])
 	s = bam1_aux(b);
 	while (s < b->data + b->data_len) {
 		int x = (int)s[0]<<8 | s[1];
+		printf("%c%c\n", s[0], s[1]);
 		s += 2;
 		if (x == y) return s;
 		__skip_tag(s);
diff --git a/bamtk.c b/bamtk.c
index a7c67ab..ef0e052 100644
--- a/bamtk.c
+++ b/bamtk.c
@@ -9,7 +9,7 @@
 #endif
 
 #ifndef PACKAGE_VERSION
-#define PACKAGE_VERSION "0.1.5-28 (r444)"
+#define PACKAGE_VERSION "0.1.5-29 (r445)"
 #endif
 
 int bam_taf2baf(int argc, char *argv[]);