From: peterjc
Date: Fri, 30 Mar 2012 16:39:32 +0000 (+0100)
Subject: Fixed the next silly error on that line.
X-Git-Url: https://git.donarmstrong.com/?p=samtools.git;a=commitdiff_plain;h=62254fe022c4c69988c2a71dabf93f90d93e0014;hp=d2496f2aaae8022e04d10b9fd09eb305026a77df
Fixed the next silly error on that line.
---
diff --git a/padding.c b/padding.c
index 6e40833..a093d45 100644
--- a/padding.c
+++ b/padding.c
@@ -136,7 +136,7 @@ int bam_pad2unpad(bamFile in, bamFile out)
pre_op = bam_cigar_op(cigar2[i-2]);
post_op = bam_cigar_op(cigar2[i]);
/* Note don't need to check for X/= as code above will use M only */
- if ((pre_op == BAM_CMATCH || pre_op == BAM_CDIFF) && (post_op == BAM_CMATCH || post_op == BAM_CDIFF)) {
+ if ((pre_op == BAM_CMATCH || pre_op == BAM_CDEL) && (post_op == BAM_CMATCH || post_op == BAM_CDEL)) {
/* This is a redundant P operator */
cigar2[i-1] = 0; // i.e. 0M
/* If had same operator either side, combine them in post_op */