git.donarmstrong.com Git - samtools.git/commit

]> git.donarmstrong.com Git - samtools.git/commit

author	Heng Li <lh3@live.co.uk>
	Fri, 3 Jun 2011 18:49:27 +0000 (18:49 +0000)
committer	Heng Li <lh3@live.co.uk>
	Fri, 3 Jun 2011 18:49:27 +0000 (18:49 +0000)
commit	80658e4d152b53bd55927c432ceece7702ab49d7
tree	c239e5ef257b96baff7d568c75cc4e1537a3f725	tree \| snapshot
parent	c350a570e955d5b4c2c13f607b7442df6d332c67	commit \| diff

* 0.1.16-dev (r969:252)
* faidx/view: smarter way to parse a region string
* index: more rigorously check the sorting order
* Makefile: added -s to ar
* bcftools: compute 2-degree P-value by default
* bcftools: compute the ML estimate of the allele count

14 files changed:

Makefile		diff \| blob \| history
bam.h		diff \| blob \| history
bam_aux.c		diff \| blob \| history
bam_import.c		diff \| blob \| history
bam_index.c		diff \| blob \| history
bam_plcmd.c		diff \| blob \| history
bcftools/bcf.h		diff \| blob \| history
bcftools/bcfutils.c		diff \| blob \| history
bcftools/call1.c		diff \| blob \| history
bcftools/em.c		diff \| blob \| history
bcftools/main.c		diff \| blob \| history
bcftools/prob1.c		diff \| blob \| history
bcftools/prob1.h		diff \| blob \| history
faidx.c		diff \| blob \| history

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