* Merge from branches/dev/

[samtools.git] / source.dot

diff --git a/source.dot b/source.dot
index cfa2222045a4c0993108be83a2706d137f5b0423..17357740ba0e84a716960e024d03322b68af28a0 100644 (file)
--- a/source.dot
+++ b/source.dot
@@ -5,11 +5,15 @@ digraph {
   sort[label="bam_sort.c\n(sort, merge)"]
   index[label="bam_index.c\n(index)"]
   tview[label="bam_tview.c\n(tview)"]
+  glf[label="glf.c\n(glfview)"]
+  rmdup[label="bam_rmdup.c\n(rmdup)"]
+  fixmate[label="bam_mate.c\n(fixmate)"]
   "bam_aux.c" -> {"bam.c", import}
-  "bgzf.c" -> "bam.c"
-  "bam.c" -> {index, "bam_pileup.c", sort, import}
+  glf -> {"bam_maqcns.c", plcmd}
+  "bgzf.c" -> {"bam.c", glf}
+  "bam.c" -> {index, "bam_pileup.c", sort, import, rmdup, fixmate}
   "bam_pileup.c" -> {"bam_lpileup.c", plcmd}
   {"bam_lpileup.c", index, faidx, "bam_maqcns.c"} -> tview
   {import, faidx, "bam_maqcns.c"} -> plcmd
-  {tview, plcmd, faidx, sort, import, index} -> "bamtk.c\n(view)"
+  {tview, plcmd, faidx, sort, import, index, glf, rmdup, fixmate} -> "bamtk.c\n(view)"
 }
\ No newline at end of file