backup commit

[samtools.git] / bcftools / prob1.h

diff --git a/bcftools/prob1.h b/bcftools/prob1.h
index eb0b145285715c54d997693c449b5262462cb904..6f9315565ba1369626d185ac30fcab3502e611d7 100644 (file)
--- a/bcftools/prob1.h
+++ b/bcftools/prob1.h
@@ -33,7 +33,7 @@ extern "C" {
        void bcf_p1_destroy(bcf_p1aux_t *ma);
     void bcf_p1_set_ploidy(bcf1_t *b, bcf_p1aux_t *ma);
        int bcf_p1_cal(const bcf1_t *b, int do_contrast, bcf_p1aux_t *ma, bcf_p1rst_t *rst);
-    int call_multiallelic_gt(bcf1_t *b, bcf_p1aux_t *ma, double threshold);
+    int call_multiallelic_gt(bcf1_t *b, bcf_p1aux_t *ma, double threshold, int var_only);
        int bcf_p1_call_gt(const bcf_p1aux_t *ma, double f0, int k);
        void bcf_p1_dump_afs(bcf_p1aux_t *ma);
        int bcf_p1_read_prior(bcf_p1aux_t *ma, const char *fn);