* change the order of PL/GL according to the latest VCF spec

[samtools.git] / bcftools / bcf.tex

diff --git a/bcftools/bcf.tex b/bcftools/bcf.tex
index 53bb8b022a27269c60fa1c353bfd65fe45337905..89573642621a4adf99e224d40f23b680eb43fd1c 100644 (file)
--- a/bcftools/bcf.tex
+++ b/bcftools/bcf.tex
@@ -48,8 +48,8 @@
 {\tt PL} & {\tt uint8\_t[n*G]} & {Phred-scaled likelihood of data}\\
 {\tt PS} & {\tt uint32\_t[n]} & {Phase set}\\
 %{\tt SP} & {\tt uint8\_t[n]} & {Strand bias P-value (bcftools only)}\\
-\emph{Integer} & {\tt int32\_t[n*X]} & {Fix-sized custom Integer; $X$ can be $1$, $A$ or $G$.}\\
-\emph{Numeric} & {\tt double[n*X]} & {Fix-sized custom Numeric; $X$ can be $1$, $A$ or $G$.}\\
+\emph{Integer} & {\tt int32\_t[n*X]} & {Fix-sized custom Integer; $X$ defined in the header}\\
+\emph{Numeric} & {\tt double[n*X]} & {Fix-sized custom Numeric}\\
 \emph{String} & {\tt uint32\_t+char*} & {\tt NULL} padded concat. strings (int equals to the length) \\
 \hline
 \end{tabular}