}
}
if (optind + 2 > argc) {
- fprintf(stderr, "Usage: samtools sort [-n] [-m <maxMem>] <in.baf> <out.prefix>\n");
+ fprintf(stderr, "Usage: samtools sort [-n] [-m <maxMem>] <in.bam> <out.prefix>\n");
return 1;
}
bam_sort_core(is_by_qname, argv[optind], argv[optind+1], max_mem);