* samtools-0.1.8-7 (r639)

[samtools.git] / bam_plcmd.c

diff --git a/bam_plcmd.c b/bam_plcmd.c
index a1c87ab6f67831fe4f949a4625f5cd685b72317d..bbdca64d4cc38ac4edde1691f527a886880eac2b 100644 (file)
--- a/bam_plcmd.c
+++ b/bam_plcmd.c
@@ -701,7 +701,7 @@ int bam_mpileup(int argc, char *argv[])
                fprintf(stderr, "         -M INT      cap mapping quality at INT [%d]\n", mplp.max_mq);
                fprintf(stderr, "         -q INT      filter out alignment with MQ smaller than INT [%d]\n", mplp.min_mq);
                fprintf(stderr, "         -t FLOAT    scaled mutation rate [%lg]\n", mplp.theta);
-               fprintf(stderr, "         -P STR      prior: full, flat, cond2 [full]");
+               fprintf(stderr, "         -P STR      prior: full, flat, cond2 [full]\n");
                fprintf(stderr, "         -c          generate VCF output (consensus calling)\n");
                fprintf(stderr, "         -v          show variant sites only\n");
                fprintf(stderr, "         -S          calculate AFS (slow, to stderr)\n");