fixed a few bugs in the indel caller. Probably there are more.

[samtools.git] / bam2bcf.c

diff --git a/bam2bcf.c b/bam2bcf.c
index fa9d7a47b762235ff6ea0a212c01b0c406bee301..89d6f9001bfd6dfaed29fa49430e3a23289f58da 100644 (file)
--- a/bam2bcf.c
+++ b/bam2bcf.c
@@ -20,7 +20,7 @@ bcf_callaux_t *bcf_call_init(double theta, int min_baseQ)
        if (theta <= 0.) theta = CALL_DEFTHETA;
        bca = calloc(1, sizeof(bcf_callaux_t));
        bca->capQ = 60;
-       bca->openQ = 40; bca->extQ = 20; bca->tandemQ = 70;
+       bca->openQ = 40; bca->extQ = 20; bca->tandemQ = 100;
        bca->min_baseQ = min_baseQ;
        bca->e = errmod_init(1. - theta);
        return bca;