* samtools-0.1.12-2 (r877)

[samtools.git] / bam2bcf.c

diff --git a/bam2bcf.c b/bam2bcf.c
index 088635c0b04a549b762d1a3b28efad82f4bb5c80..08120fc46c2a3902e01582b45de0659d4b333eb6 100644 (file)
--- a/bam2bcf.c
+++ b/bam2bcf.c
@@ -23,6 +23,8 @@ bcf_callaux_t *bcf_call_init(double theta, int min_baseQ)
        bca->openQ = 40; bca->extQ = 20; bca->tandemQ = 100;
        bca->min_baseQ = min_baseQ;
        bca->e = errmod_init(1. - theta);
+       bca->min_frac = 0.002;
+       bca->min_support = 1;
        return bca;
 }