From 1c50ecf9ddc331100184b9c3f95b9d400e4e8303 Mon Sep 17 00:00:00 2001 From: Bo Li Date: Wed, 21 Aug 2013 13:07:52 -0500 Subject: [PATCH] Fixed a minor bug which only affects paired-end reads for reporting how many alignments are processed when RSEM generates BAM outputs --- BamWriter.h | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/BamWriter.h b/BamWriter.h index a4e7dc5..2a325d6 100644 --- a/BamWriter.h +++ b/BamWriter.h @@ -106,7 +106,7 @@ void BamWriter::work(HitWrapper wrapper) { bam1_t *b, *b2; PairedEndHit *hit; - int cnt = 0; + HIT_INT_TYPE cnt = 0; b = bam_init1(); b2 = bam_init1(); -- 2.39.2