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Imported Upstream version 1.2.17
[rsem.git] / README.md
2014-06-09 Bo LiUpdated README.md and WHAT_IS_NEW blob | commitdiff | raw
2014-04-03 Bo LiUse PATH env to instead the variable blob | commitdiff | raw | diff to current
2014-03-27 Bo LiModified the acknowledgement section of README.md blob | commitdiff | raw | diff to current
2014-03-22 Bo LiAdded '--seed' option for 'rsem-simulate-reads' blob | commitdiff | raw | diff to current
2014-03-21 Bo LiAdded support for allele-specific expression estimation blob | commitdiff | raw | diff to current
2014-03-09 Bo LiFixed a typo in rsem-calculate-expression's document... blob | commitdiff | raw | diff to current
2014-02-14 Bo LiAdded Bowtie 2 support blob | commitdiff | raw | diff to current
2014-01-09 Bo LiREADME.md is updated blob | commitdiff | raw | diff to current
2014-01-09 Bo LiUpdated samtools to 0.1.19 blob | commitdiff | raw | diff to current
2013-11-22 Bo LiProvided a more detailed description for how to simulat... blob | commitdiff | raw | diff to current
2013-09-07 Bo Li'rsem-run-ebseq': Added 'output_file.condmeans' for... blob | commitdiff | raw | diff to current
2013-09-02 Bo LiAdded support for DE analysis on multiple conditions... blob | commitdiff | raw | diff to current
2013-06-26 Bo LiUpdated EBSeq from v1.1.5 to v1.1.6 and fixed a bug... blob | commitdiff | raw | diff to current
2013-04-15 Bo LiModifed README.md and WHAT_IS_NEW blob | commitdiff | raw | diff to current
2013-01-07 Bo LiUpdated EBSeq to v1.1.5 blob | commitdiff | raw | diff to current
2012-11-30 Bo Li- Added poly(A) tails to 'reference_name.transcripts... blob | commitdiff | raw | diff to current
2012-09-24 Bo LiFixed a bug to make RSEM generated BAM file valid input... blob | commitdiff | raw | diff to current
2012-09-11 Bo LiREADME.md is changed blob | commitdiff | raw | diff to current
2012-09-11 Bo LiAdded a script, 'rsem-find-DE', to run EBSeq automatically blob | commitdiff | raw | diff to current
2012-07-02 Bo Lirsem v1.1.21 blob | commitdiff | raw | diff to current
2012-06-05 Bo LiMade the BAM output of RSEM have all information contai... blob | commitdiff | raw | diff to current
2012-04-26 Bo LiIncluded EBSeq for downstream differential expression... blob | commitdiff | raw | diff to current
2012-04-15 Bo LiAdded some instructions on how to visualize transcript... blob | commitdiff | raw | diff to current
2012-03-11 Bo LiModified makefile to work for gcc version 4.5.3 or... blob | commitdiff | raw | diff to current
2012-03-11 Bo LiModified 'convert-sam-for-rsem' so that this program... blob | commitdiff | raw | diff to current
2012-02-09 Bo LiThe order of @SQ tags in SAM/BAM files can be arbitrary now blob | commitdiff | raw | diff to current
2012-01-18 Bo Lirsem v1.1.14 blob | commitdiff | raw | diff to current
2011-12-31 Bo Lirelax the requirement about GTF attribute format blob | commitdiff | raw | diff to current
2011-12-14 Bo LiMerge remote-tracking branch 'origin/master' blob | commitdiff | raw | diff to current
2011-12-10 Bo Liupdated some description blob | commitdiff | raw | diff to current
2011-12-04 Bo Lirsem-v1.1.14b3 blob | commitdiff | raw | diff to current
2011-11-28 Bo Litested version for tbam2gbam blob | commitdiff | raw | diff to current
2011-10-19 Bo Lirsem v1.1.12, add a script to extract transcript-to... blob | commitdiff | raw | diff to current
2011-04-18 Bo LiRSEM v1.1.8 blob | commitdiff | raw | diff to current
2011-04-18 Bo LiRSEM v1.1.8 blob | commitdiff | raw | diff to current
2011-03-22 Bo LiREADME.md is updated to include C++, Perl and R as... blob | commitdiff | raw | diff to current
2011-03-18 Bo Liv1.1.5.b blob | commitdiff | raw | diff to current
2011-03-11 Bo Lirename plotModel.R to rsem-plot-model blob | commitdiff | raw | diff to current
2011-03-11 Bo LiREADME.md changed blob | commitdiff | raw | diff to current
2011-03-11 Bo LiEnable RSEM to visualize the model learned from data blob | commitdiff | raw | diff to current
2011-02-21 Bo LiREADME.md modified blob | commitdiff | raw | diff to current
2011-02-21 Bo LiREADME.md blob | commitdiff | raw | diff to current
2011-02-21 Bo LiREADME.md modified to display correctly in github blob | commitdiff | raw | diff to current
2011-02-21 Bo LiREADME.md changed blob | commitdiff | raw | diff to current
2011-02-17 Bo Lichange README.txt to README.md blob | commitdiff | raw | diff to current
Debian packaging of rsem