From: Bo Li <bli@cs.wisc.edu>
Date: Tue, 8 Jan 2013 16:11:50 +0000 (-0600)
Subject: Fixed a bug in 'EBSeq/rsem-for-ebseq-generate-ngvector-from-clustering-info' which... 
X-Git-Url: https://git.donarmstrong.com/?p=rsem.git;a=commitdiff_plain;h=da3cf29fde8e879f83cde41831ddbc0456ba35dd

Fixed a bug in 'EBSeq/rsem-for-ebseq-generate-ngvector-from-clustering-info' which may crash the script
---

diff --git a/EBSeq/rsem-for-ebseq-generate-ngvector-from-clustering-info b/EBSeq/rsem-for-ebseq-generate-ngvector-from-clustering-info
index 312dbfa..ccc52f7 100755
--- a/EBSeq/rsem-for-ebseq-generate-ngvector-from-clustering-info
+++ b/EBSeq/rsem-for-ebseq-generate-ngvector-from-clustering-info
@@ -6,7 +6,7 @@ if (length(argv) != 2) {
   q(status = 1)
 }
 
-data <- read.table(file = argv[1], stringsAsFactors = F)
+data <- read.table(file = argv[1], stringsAsFactors = F, sep = "\t")
 idx <- data[,2] >= 0
 kmr <- kmeans(data[idx, 2], 3)
 order <- order(kmr$centers)
diff --git a/WHAT_IS_NEW b/WHAT_IS_NEW
index 4e1690d..64dc6e5 100644
--- a/WHAT_IS_NEW
+++ b/WHAT_IS_NEW
@@ -1,3 +1,9 @@
+RSEM v1.2.3
+
+- Fixed a bug in 'EBSeq/rsem-for-ebseq-generate-ngvector-from-clustering-info' which may crash the script
+
+--------------------------------------------------------------------------------------------
+
 RSEM v1.2.2
 
 - Updated EBSeq to v1.1.5