From: Bo Li <bli@cs.wisc.edu>
Date: Fri, 12 Aug 2011 18:13:49 +0000 (-0500)
Subject: fix one bug will lead using not the last theta value estimates
X-Git-Url: https://git.donarmstrong.com/?p=rsem.git;a=commitdiff_plain;h=534e12beacb83144d7d305d5cabfc8a9272b1a75

fix one bug will lead using not the last theta value estimates
---

diff --git a/EM.cpp b/EM.cpp
index 15dd117..5f9b8c0 100644
--- a/EM.cpp
+++ b/EM.cpp
@@ -571,6 +571,7 @@ void EM() {
 
 	//calculate expected weights and counts using learned parameters
 	updateModel = false; calcExpectedWeights = true;
+	for (int i = 0; i <= M; i++) probv[i] = theta[i];
 	for (int i = 0; i < nThreads; i++) {
 		rc = pthread_create(&threads[i], &attr, E_STEP<ReadType, HitType, ModelType>, (void*)(&fparams[i]));
 		if (rc != 0) { fprintf(stderr, "Cannot create thread %d when calculate expected weights! (numbered from 0)\n", i); exit(-1); }