From: Bo Li <bli@cs.wisc.edu>
Date: Sat, 14 Apr 2012 03:22:03 +0000 (-0500)
Subject: Fixed a bug related to intermediate output displaying in wiggle.cpp
X-Git-Url: https://git.donarmstrong.com/?p=rsem.git;a=commitdiff_plain;h=1006dd2a931fc78549a03541b1317b7b052befb5

Fixed a bug related to intermediate output displaying in wiggle.cpp
---

diff --git a/wiggle.cpp b/wiggle.cpp
index c0cbdcc..b0cb7d3 100644
--- a/wiggle.cpp
+++ b/wiggle.cpp
@@ -44,7 +44,7 @@ void build_wiggles(const std::string& bam_filename,
 	memset(used, 0, sizeof(bool) * header->n_targets);
 
     int cur_tid = -1; //current tid;
-    HIT_INT_TYPE cnt;
+    HIT_INT_TYPE cnt = 0;
     bam1_t *b = bam_init1();
     Wiggle wiggle;
 	while (samread(bam_in, b) >= 0) {