X-Git-Url: https://git.donarmstrong.com/?p=rsem.git;a=blobdiff_plain;f=rsem-generate-data-matrix;fp=rsem-generate-data-matrix;h=26390c103e2e42bc9e7029b1a75510dfe7e53722;hp=f85156d0bf68e1aa3bd138da730de578f4594ba6;hb=5a994ba12cd39d4846c542bb8d56af07a3fc28b4;hpb=910250881a4c3e48a33aa427b82131acda914da3

diff --git a/rsem-generate-data-matrix b/rsem-generate-data-matrix
index f85156d..26390c1 100755
--- a/rsem-generate-data-matrix
+++ b/rsem-generate-data-matrix
@@ -4,7 +4,7 @@ use strict;
 
 if (scalar(@ARGV) == 0) {
     print "Usage: rsem-generate-data-matrix sampleA.[alleles/genes/isoforms].results sampleB.[alleles/genes/isoforms].results ... > output_name.matrix\n";
-    print "All result files should have the same file type. The 'TPM' columns of every result file are extracted to form the data matrix.\n";
+    print "All result files should have the same file type. The 'expected_count' columns of every result file are extracted to form the data matrix.\n";
     exit(-1);
 }