X-Git-Url: https://git.donarmstrong.com/?p=rsem.git;a=blobdiff_plain;f=makefile;h=e1a47f25bd7f1c033550ac205393212ddb896921;hp=c9f37a8279701589aae3b593874dab5e399bc256;hb=1b2999c4407ef8419fb89b66b843b7141caff4da;hpb=6eec553ba4ab1cb1c6f48cd14d9e5c92c7d85798 diff --git a/makefile b/makefile index c9f37a8..e1a47f2 100644 --- a/makefile +++ b/makefile @@ -96,10 +96,10 @@ BamConverter.h : utils.h my_assert.h sam/sam.h sam/bam.h sam_rsem_aux.h sam_rsem rsem-tbam2gbam : utils.h Transcripts.h Transcript.h bc_aux.h BamConverter.h sam/sam.h sam/bam.h sam/libbam.a sam_rsem_aux.h sam_rsem_cvt.h tbam2gbam.cpp sam/libbam.a $(CC) -O3 -Wall tbam2gbam.cpp sam/libbam.a -lz -o $@ -rsem-bam2wig : wiggle.h wiggle.o sam/libbam.a bam2wig.cpp +rsem-bam2wig : utils.h my_assert.h wiggle.h wiggle.o sam/libbam.a bam2wig.cpp $(CC) -O3 -Wall bam2wig.cpp wiggle.o sam/libbam.a -lz -o $@ -rsem-bam2readdepth : wiggle.h wiggle.o sam/libbam.a bam2readdepth.cpp +rsem-bam2readdepth : utils.h my_assert.h wiggle.h wiggle.o sam/libbam.a bam2readdepth.cpp $(CC) -O3 -Wall bam2readdepth.cpp wiggle.o sam/libbam.a -lz -o $@ wiggle.o: sam/bam.h sam/sam.h wiggle.cpp wiggle.h