X-Git-Url: https://git.donarmstrong.com/?p=rsem.git;a=blobdiff_plain;f=WHAT_IS_NEW;h=2c6f2c7c33257c44434857a2359e855e44dd078e;hp=24ae065d19dc6a56093fba3286d7ff0729a57147;hb=0f8fbc39759d8a8a4fa755903b8bde403b0da6c9;hpb=66a1547e5d549a915cefb729222be915b87fb34d

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+RSEM v1.2.12
+
+- Enabled allele-specific expression estimation
+- Added '--calc-pme' option for 'rsem-calculate-expression' to calculate posterior mean estimates only (no credibility intervals)
+- Modified the shebang line of RSEM perl scripts to make them more portable
+- Added '--seed' option for 'rsem-simulate-reads' to enable users set the seed of random number generator used by the simulation
+- Modified the transcript extraction behavior of 'rsem-prepare-reference'. For transcripts that cannot be extracted, instead of failing the whole script, warning information is produced. Those transcripts are ignored
+
+--------------------------------------------------------------------------------------------
+
 RSEM v1.2.11
 
 - Enabled RSEM to use Bowtie 2 aligner (indel, local and discordant alignments are not supported yet)