From 9c1633036447d4c3a13b0affc813c2364c0730e2 Mon Sep 17 00:00:00 2001
From: Don Armstrong <don@donarmstrong.com>
Date: Wed, 12 Jul 2017 18:51:27 -0700
Subject: [PATCH] update resume (for genapsys)

---
 dla-resume.org | 32 +++++++++++++++++++-------------
 dlaresume.cls  |  2 +-
 2 files changed, 20 insertions(+), 14 deletions(-)

diff --git a/dla-resume.org b/dla-resume.org
index d7091e3..3c57f18 100644
--- a/dla-resume.org
+++ b/dla-resume.org
@@ -13,7 +13,9 @@
   {\footnotesize
   \href{mailto:\myemail}{\myemail} \hfill
   +1~714-813-8531 \\
-  {\centering  \href{\myweb}{\myweb} }
+  {\centering  \href{\myweb}{\myweb} 
+  \href{https://github.com/dondelelcaro}{https://github.com/dondelelcaro}
+  }
   }
   \vfill
   \end{minipage}
@@ -37,30 +39,34 @@
 + *BS* in Biology
 * Skills
 ** Genomics and Epigenomics
-+ Genomics and Epigenomics of complex human diseases including
-  PTSD, Systemic Lupus Erythematosus, and Alzheimer's Disease using
-  cross-sectional and longitudinal experimental designs
++ *NGS* and array-based Genomics and Epigenomics of complex human
+  diseases using *RNA-seq*, targeted DNA sequencing, *RRBS*, Illumina
+  bead arrays, and Affymetrix microarrays from sample collection to
+  publication.
++ Reproducible, scalable bioinformatics analysis using make,
+  *nextflow*, and *cwl* based workflows on cloud- and cluster-based
+  systems on terabyte-scale datasets
++ Alignment, annotation, and variant calling using existing and
+  custom-written software, including *GATK*, *bwa*, *STAR*, and
+  *kallisto*.
 + Correcting for and experimental design to overcome multiple
   testing, confounders, and batch effects using Bayesian and
   frequentist methods approaches
-+ Reproducible, scalable analysis using workflows on cloud- and
-  cluster-based systems on terabyte-scale datasets
-+ Using evolutionary genomics to identify causal human variants
+# + Using evolutionary genomics to identify causal human variants
 ** Statistics
 + Statistical modeling (regression, inference, Bayesian and
   frequentist approaches in very large (> 1TB) datasets)
 + Addressing confounders and batch effects
-+ Reproducible research
+# + Reproducible research
 ** Big Data
-+ Parallel and Cloud Computing
++ Parallel and Cloud Computing (slurm, torque, AWS, OpenStack, Azure)
 + Inter-process communication: MPI, OpenMP, Hadoop
 + Filestorage: Gluster, CEFS, GPFS, Lustre
-+ Cloud based-infrastructure: Azure, AWS, Docker, cloud-init
-+ Debian GNU/Linux system administration
++ Linux system administration
 ** Mentoring and Leadership
 + Mentored graduate students and Outreachy and Google Summer of Code
   interns
-+ Chairperson of the Debian Technical Committee
++ Former chair of Debian's Technical Committee
 + Head developer behind https://bugs.debian.org
 ** Software Development
 + Languages: perl, R, C, C++, python, groovy, assembly, sh, make
@@ -108,7 +114,7 @@
   studies.
 ** Debian Developer
 + 2004--Present. \emph{Debian Project}, Developer; Technical Committee
-  Member (2010--Present), Technical Committee Chair (2015--2016).
+  Member (2010--2016), Technical Committee Chair (2015--2016).
 * Authored Software
 + *[[http://bugs.debian.org][Debbugs]]*: Bug tracking software for the Debian GNU/Linux
    distribution. [[https://bugs.debian.org]]
diff --git a/dlaresume.cls b/dlaresume.cls
index 833537b..9e6c1b2 100644
--- a/dlaresume.cls
+++ b/dlaresume.cls
@@ -104,7 +104,7 @@
 \def\mycopyright{\myauthor}
 \def\myaddress{}
 \def\myemail{don@donarmstrong.com}
-\def\myweb{https://www.donarmstrong.com/}
+\def\myweb{https://www.donarmstrong.com}
 \def\myphone{+1 714-813-8531}
 
 % create a special cvlist environment to format the items
-- 
2.39.2