#+BEGIN_EXPORT latex
%% Name
- \noindent{\Huge {\textsc{\textbf{\myauthor}}}}
+ \noindent{\color{headings}\fontsize{24pt}{24pt}\selectfont {\textsc{\textbf{\myauthor}}}}
\hfill
\begin{minipage}[t]{0.0in}
% dummy (needed here)
\end{minipage}
- \medskip
+% \medskip
% Address and contact block
\hfill
\begin{minipage}[t]{1.7in}
\href{mailto:\myemail}{\myemail} \\
\href{\myweb}{\myweb}}
\end{minipage}
+ %
+ \begin{minipage}[t]{0.75in}
+ \qrcode[tight,level=L,link,height=0.75in]{https://dla2.us/res}
+ \end{minipage}
- \medskip
+% \medskip
#+END_EXPORT
#+BEGIN_EXPORT latex
-\begin{minipage}[t]{0.33\textwidth}
+\begin{minipage}[t]{0.4\textwidth}
#+END_EXPORT
* Education
** UC Riverside
-+ *PhD* in Cell, Molecular and Developmental Biology. July 2008.
-+ *BS* in Biology. July 2001.
++ *PhD* in Cell, Molecular and Developmental Biology
++ *BS* in Biology
* Skills
+** Genomics and Epigenomics
++ Genomics and Epigenomics of complex human diseases including
+ PTSD, Systemic Lupus Erythematosus, and Alzheimer's Disease using
+ cross-sectional and longitudinal experimental designs
++ Correcting for and experimental design to overcome multiple
+ testing, confounders, and batch effects using Bayesian and
+ frequentist methods approaches
++ Reproducible, scalable analysis using workflows on cloud- and
+ cluster-based systems on terabyte-scale datasets
++ Using evolutionary genomics to identify causal human variants
** Statistics
- + Multiple testing and confounders
- + Genetic epidemiology of human populations
- + Modeling (GLM, ordered models, etc.)
-** -omics
- + DNA Methylation analysis in humans and non-model organisms
- + RNA quantification and differential analysis using RNAseq and
- arrays in humans and non-model organisms
- + DNA variant calling and analysis in tens of thousands of samples
++ Statistical modeling
++ Addressing confounders and batch effects
++ Reproducible research
+** Big Data
++ Parallel and Cloud Computing
++ Inter-process communication: MPI, OpenMP, Hadoop
++ Filestorage: Gluster, CEFS, GPFS, Lustre
++ Cloud based-infrastructure: Azure, AWS, Docker, cloud-init
++ Debian GNU/Linux system administration
+** Mentoring and Leadership
++ Mentored graduate students and Outreachy and Google Summer of Code
+ interns
++ Chairperson of the Debian Technical Committee
++ Head developer behind https://bugs.debian.org
** Software Development
- + Languages: perl, R, C, C++, assembly, sh
- + Collaborative Development: git, issue tracking, testing harnesses
- + Databases: Postgresql (PL/SQL), SQLite, Mysql
-** Parallel and Cloud Computing
- + Inter-process communication: MPI, OpenMP, Hadoop
- + Filestorage: Gluster, CEFS, GPFS, Lustre
- + Cloud based-infrastructure: Azure, AWS, Docker, cloud-init
- + Debian GNU/Linux system administration
++ Languages: perl, R, C, C++, python, groovy, assembly, sh, make
++ Collaborative Development: git, travis, continuous integration,
+ automated testing
++ Databases: Postgresql (PL/SQL), SQLite, Mysql
+# ** Consortia Involvement
+# + *H3A Bionet*: Generating workflows and cloud resources for H3 Africa
+# + *Psychiatric Genomics Consortium*: Identification of epigenetic
+# variants which are correlated with PTSD.
+# + *SLEGEN*: System lupus erythematosus genetics consortium.
#+BEGIN_EXPORT latex
\end{minipage}
+ \hfill
+ \begin{minipage}[t]{0.0in}
+ % dummy (needed here)
+ \end{minipage}
+ \medskip
\hfill
-\begin{minipage}[t]{0.66\textwidth}
+\begin{minipage}[t]{0.55\textwidth}
#+END_EXPORT
* Experience
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\def\myauthor{Don Armstrong}
\def\mycopyright{\myauthor}
\def\myaddress{}
\def\myemail{don@donarmstrong.com}
-\def\myweb{http://www.donarmstrong.com/}
+\def\myweb{https://www.donarmstrong.com/}
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\ No newline at end of file