X-Git-Url: https://git.donarmstrong.com/?p=reference.git;a=blobdiff_plain;f=blib%2Fscript%2Fget_reference;fp=blib%2Fscript%2Fget_reference;h=0000000000000000000000000000000000000000;hp=f71eb68f291e4f6501ed87bf57df190eb550020d;hb=086538a2425d531df6c90013cf8ea40711572604;hpb=867806a4b5d5ec60310161f0bca43d2cdcdfed52 diff --git a/blib/script/get_reference b/blib/script/get_reference deleted file mode 100755 index f71eb68..0000000 --- a/blib/script/get_reference +++ /dev/null @@ -1,114 +0,0 @@ -#!/usr/bin/perl - -eval 'exec /usr/bin/perl -S $0 ${1+"$@"}' - if 0; # not running under some shell -# This program is part of da_reference, and is released under the -# terms of the GPL version 2, or any later version, at your -# option. See the file README and COPYING for more information. -# Copyright 2004 by Don Armstrong . -# $Id: get_reference 45 2013-09-10 18:05:31Z don $ - - -use warnings; -use strict; - - -use Getopt::Long; -use Reference; -use Pod::Usage; - -=head1 NAME - -get_reference - Retrieve a reference from somewhere and output the -formatted reference to STDOUT. - -=head1 SYNOPSIS - -get_reference [options] referenceid [referenceid ...] - - Options: - --pmid,-p referenceid is a pub med id. (Default) - --bibtex,-b ouput in bibtex format (Default) - --debug, -d debugging level (Default 0) - --help,-h display this help - --man,-m display manual - -=head1 OPTIONS - -=over - -=item B<--pmid, -p> - -The referenceid listed is a Pub Med ID. (Default) - -=item B<--bibtex, -b> - -Output the listed referenceid in BibTeX format. (Default) - -=item B<--help, -h> - -Display brief useage information. - -=item B<--man, -m> - -Display this manual. - -=back - -=head1 EXAMPLES - - get_reference -p -b -d 1 123456; - - get_reference 123456; - -=cut - - - -use vars qw($DEBUG); - -my %options = (pmid => 1, - bibtex => 1, - debug => 0, - help => 0, - man => 0, - suggest_name => 0, - journal_titles => 0, - ); - -GetOptions(\%options,'pmid|p','bibtex|b','suggest_name|suggest-name','debug|d','help|h','man|m', - 'journal_titles|journal-titles|journal_title|journal-titles', - ); - -pod2usage() if $options{help}; -pod2usage({verbose=>2}) if $options{man}; - -$DEBUG = $options{debug}; - -if ($options{pmid} and $options{bibtex}) { - use Reference::Type::Article; - use Reference::Retrieve::PubMed; - use Reference::Output::Bibtex; - use Reference::Output::Filename; - use Encode qw(encode_utf8); - $Reference::Retrieve::PubMed::DEBUG = $options{debug}; - foreach my $pmid (@ARGV) { - next unless ($pmid) = $pmid =~ /(\d+)/; - print STDERR "dealing with $pmid\n" if $DEBUG; - my $reference = scalar Reference::Retrieve::PubMed::get_reference_by_pmid(pmid => $pmid); - print STDERR "Unable to retrieve reference for $pmid\n" and next if not defined $reference; - if ($options{suggest_name}) { - # try to suggest a name for the reference - print '%Filename: '.lc(encode_utf8(Reference::Output::Bibtex::convert_to_utf8(filename($reference))))."\n"; - } - if ($options{journal_titles}) { - print '%Medline: @string {'.$reference->journal(output=>'bibtex').'="'. - $reference->journal(output=>'medline').qq("}\n); - print '%isoabbr: @string {'.$reference->journal(output=>'bibtex').'="'. - $reference->journal(output=>'iso').qq("}\n); - print '%full: @string {'.$reference->journal(output=>'bibtex').'="'. - $reference->journal().qq("}\n); - } - print scalar bibtex($reference); - } -}