X-Git-Url: https://git.donarmstrong.com/?p=org-ref.git;a=blobdiff_plain;f=org-ref.org;h=1776f66c8bd52525327423c462659621be6caf9e;hp=b232f529d778ff96d8b6cb97fe1120bda7a0b21a;hb=716e4f316ac36aa47d2234e9a626260bb055cd29;hpb=28479ce09ce37e969b09898207f6187b0efc91e9

diff --git a/org-ref.org b/org-ref.org
index b232f52..1776f66 100644
--- a/org-ref.org
+++ b/org-ref.org
@@ -280,22 +280,28 @@ You can define a new citation link like this:
 ** Messages for link at cursor
 Here we setup code that shows you a context message for the element under the cursor when emacs is idle.
 #+BEGIN_SRC emacs-lisp :tangle org-ref.el
+(defvar org-ref-message-timer nil
+  "Variable to store the link message timer in.")
 
-(when org-ref-show-citation-on-enter
- (setq org-ref-message-timer
-       (run-with-idle-timer 0.5 t 'org-ref-link-message)))
 
 (defun org-ref-show-link-messages ()
   "Turn on link messages. You will see a message in the
 minibuffer when on a cite, ref or label link."
   (interactive)
-  (setq org-ref-message-timer
-	(run-with-idle-timer 0.5 t 'org-ref-link-message))
-  )
+  (or org-ref-message-timer
+      (setq org-ref-message-timer
+	    (run-with-idle-timer 0.5 t 'org-ref-link-message))))
+
+
 (defun org-ref-cancel-link-messages ()
   "Stop showing messages in minibuffer when on a link."
   (interactive)
-  (cancel-timer org-ref-message-timer))
+  (cancel-timer org-ref-message-timer)
+  (setq org-ref-message-timer nil))
+
+
+(when org-ref-show-citation-on-enter
+  (org-ref-show-link-messages))
 
 ;; this approach caused the selected region to not be highlighted any more.
 ; (add-hook 'post-command-hook 'org-ref-link-message))
@@ -335,25 +341,91 @@ The basic idea here is to get the mouse position, and if we can determine there
 	    (goto-char p)
 	    (org-ref-link-message))))))
 
+
+(defvar org-ref-message-timer-mouse nil
+  "Store mouse timer.")
+
+
 (defvar org-ref-mouse-message-interval 0.5
   "How often to run the mouse message timer in seconds")
 
+
 (defun org-ref-mouse-messages-on ()
   "Turn on mouse messages."
   (interactive)
-  (setq org-ref-message-timer-mouse
-       (run-at-time "0.5 sec" org-ref-mouse-message-interval 'org-ref-mouse-message)))
+  (or org-ref-message-timer-mouse
+      (setq org-ref-message-timer-mouse
+	    (run-at-time "0.5 sec"
+			 org-ref-mouse-message-interval
+			 'org-ref-mouse-message))))
 
 
 (defun org-ref-mouse-messages-off ()
   "Turn off mouse messages"
   (interactive)
-  (cancel-timer org-ref-message-timer-mouse))
+  (cancel-timer org-ref-message-timer-mouse)
+  (setq org-ref-message-timer-mouse nil)
+  (message "Mouse messages are off"))
 #+END_SRC
 
 #+RESULTS:
 : org-ref-mouse-messages-off
 
+** Color-coded links
+Here we make the org-ref links a different color.
+
+citations are green
+refs are blue
+labels are black
+
+mailto:john
+
+cite:sokalski-2012-optim-ta,zhang-2011-spatial-tio2,li-2012-heter-ceram,li-2013-photoc
+
+cite*:sokalski-2012-optim-ta,zhang-2011-spatial-tio2,li-2012-heter-ceram,li-2013-photoc
+
+citenum:sokalski-2012-optim-ta,zhang-2011-spatial-tio2,li-2012-heter-ceram,li-2013-photoc
+
+#+BEGIN_SRC emacs-lisp
+(defcustom org-ref-colorize-links
+  nil
+  "When non-nil, change colors of links"
+  :group 'org-ref)
+
+(defcustom org-ref-cite-color
+  "forest green"
+  "Color of cite like links"
+  :group 'org-ref)
+
+(defcustom org-ref-ref-color
+  "royal blue"
+  "Color of ref like links"
+  :group 'org-ref)
+
+(defcustom org-ref-label-color
+  "black"
+  "Color of label links"
+  :group 'org-ref)
+
+(defvar org-ref-cite-re nil
+ "regexp for cite links")
+
+(setq org-ref-cite-re
+  (concat "\\(" (mapconcat 'identity org-ref-cite-types "\\|") "\\)"
+  ":\\([a-zA-Z0-9-_:]*,?\\)*"))
+
+(setq org-ref-cite-color "red" org-ref-colorize-links t)
+(defface org-ref-cite-face
+  `((t (:inherit org-link :foreground "red")))
+  "Color for cite links")
+
+(when org-ref-colorize-links
+  (highlight-regexp org-ref-cite-re 'org-ref-cite-face))
+#+END_SRC
+
+#+RESULTS:
+
+
 * Links
 Most of this library is the creation of functional links to help with references and citations.
 ** General utilities
@@ -2528,8 +2600,8 @@ Here is the python script for uploading.
 *************** TODO document how to get the cookies
 *************** END
 
-
-#+BEGIN_SRC python :tangle upload_bibtex_citeulike.py
+# :tangle upload_bibtex_citeulike.py
+#+BEGIN_SRC python
 #!python
 import pickle, requests, sys