#+END_SRC
#+RESULTS:
-| :member | http://id.crossref.org/member/16 | :volume | 99 | :indexed | (:timestamp 1423435577602 :date-parts [[2015 2 8]]) | :publisher | American Physical Society (APS) | :source | CrossRef | :URL | http://dx.doi.org/10.1103/PhysRevLett.99.016105 | :ISSN | [0031-9007 1079-7114] | :DOI | 10.1103/physrevlett.99.016105 | :type | journal-article | :title | Scaling Properties of Adsorption Energies for Hydrogen-Containing Molecules on Transition-Metal Surfaces | :issue | 1 | :deposited | (:timestamp 1313712000000 :date-parts [[2011 8 19]]) | :reference-count | 26 | :container-title | Phys. Rev. Lett. | :author | [(:given F. :family Abild-Pedersen) (:given J. :family Greeley) (:given F. :family Studt) (:given J. :family Rossmeisl) (:given T. :family Munter) (:given P. :family Moses) (:given E. :family Skúlason) (:given T. :family Bligaard) (:given J. :family Nørskov)] | :prefix | http://id.crossref.org/prefix/10.1103 | :score | 1.0 | :issued | (:date-parts [[2007 7]]) | :subject | [Physics and Astronomy(all)] | :subtitle | [] |
-
-or for a book:
-#+BEGIN_SRC emacs-lisp :tangle no
-(doi-utils-get-json-metadata "10.1007/978-1-4612-4968-9")
-#+END_SRC
-
-#+RESULTS:
-| :member | nil | :indexed | (:timestamp 1423773021494 :date-parts [[2015 2 12]]) | :publisher | Springer New York | :source | CrossRef | :URL | http://dx.doi.org/10.1007/978-1-4612-4968-9 | :ISBN | [http://id.crossref.org/isbn/978-0-387-96347-1 http://id.crossref.org/isbn/978-1-4612-4968-9] | :ISSN | [0172-6056] | :DOI | 10.1007/978-1-4612-4968-9 | :type | book | :title | Constructive Combinatorics | :deposited | (:timestamp 1378684800000 :date-parts [[2013 9 9]]) | :reference-count | 0 | :container-title | Undergraduate Texts in Mathematics | :author | [(:given Dennis :family Stanton) (:given Dennis :family White)] | :prefix | none | :score | 1.0 | :issued | (:date-parts [[1986]]) | :subtitle | [] |
+| :volume | 99 | :indexed | (:timestamp 1399964115538.0 :date-parts [[2014 5 13]]) | :publisher | American Physical Society (APS) | :source | CrossRef | :URL | http://dx.doi.org/10.1103/PhysRevLett.99.016105 | :ISSN | [0031-9007 1079-7114] | :DOI | 10.1103/physrevlett.99.016105 | :type | journal-article | :title | Scaling Properties of Adsorption Energies for Hydrogen-Containing Molecules on Transition-Metal Surfaces | :issue | 1 | :deposited | (:timestamp 1313712000000.0 :date-parts [[2011 8 19]]) | :reference-count | 26 | :container-title | Phys. Rev. Lett. | :author | [(:given F. :family Abild-Pedersen) (:given J. :family Greeley) (:given F. :family Studt) (:given J. :family Rossmeisl) (:given T. :family Munter) (:given P. :family Moses) (:given E. :family Skúlason) (:given T. :family Bligaard) (:given J. :family Nørskov)] | :prefix | http://id.crossref.org/prefix/10.1103 | :score | 1.0 | :issued | (:date-parts [[2007 7]]) | :subject | [Physics and Astronomy(all)] | :subtitle | [] |
We can use that data to construct a bibtex entry. We do that by defining a template, and filling it in. I wrote this template expansion code which makes it easy to substitute values like %{} in emacs lisp.
Now we define a function that fills in that template from the metadata.
-As different bibtex types share common keys, it is advantageous to separate data extraction from json, and the formatting of the bibtex entry.
-
-#+BEGIN_SRC emacs-lisp :notangle doi-utils.el
-(defmacro defpar (name &optional value)
- `(progn (defvar ,name)
- (setf ,name ,value)))
-
-(defpar doi-utils-json-metadata-extract
- '((type (plist-get results :type))
- (author (mapconcat (lambda (x) (concat (plist-get x :given) " " (plist-get x :family)))
- (plist-get results :author) " and "))
- (title (plist-get results :title))
- (subtitle (plist-get results :subtitle))
- (journal (plist-get results :container-title))
- (series (plist-get results :container-title))
- (publisher (plist-get results :publisher))
- (volume (plist-get results :volume))
- (issue (plist-get results :issue))
- (number (plist-get results :issue))
- (year (elt (elt (plist-get (plist-get results :issued) :date-parts) 0) 0))
- (month (elt (elt (plist-get (plist-get results :issued) :date-parts) 0) 1))
- (pages (plist-get results :page))
- (doi (plist-get results :DOI))
- (url (plist-get results :URL))
- (booktitle (plist-get results :container-title))))
-#+END_SRC
-
-Next, we need to define the different bibtex types. Each type has a bibtex type (for output) and the type as provided in the doi record. Finally, we have to declare the fields we want to output.
-
-#+BEGIN_SRC emacs-lisp :tangle doi-utils.el :results none
-(defpar doi-utils-bibtex-type-generators nil)
-
-(defun concat-prepare (lst &optional acc)
- "Given a list `lst' of strings and other expressions, which are
-intented to passed to `concat', concat any subsequent strings,
-minimising the number of arguments being passed to `concat'
-without changing the results."
- (cond ((null lst) (nreverse acc))
- ((and (stringp (car lst))
- (stringp (car acc)))
- (concat-prepare (cdr lst) (cons (concat (car acc) (car lst))
- (cdr acc))))
- (t (concat-prepare (cdr lst) (cons (car lst) acc)))))
-
-
-(defmacro doi-utils-def-bibtex-type (name matching-types &rest fields)
- "Define a BibTeX type identified by (symbol) `name' with
-`fields' (given as symbols), matching to retrieval expressions in
-`doi-utils-json-metadata-extract'. This type will only be used
-when the `:type' parameter in the JSON metadata is contained in
-`matching-types' - a list of strings."
- `(push (lambda (type results)
- (when (or ,@(mapcar (lambda (match-type) `(string= type ,match-type)) matching-types))
- (let ,(mapcar (lambda (field)
- (let ((field-expr (assoc field doi-utils-json-metadata-extract)))
- (if field-expr
- ;; need to convert to string first
- `(,(car field-expr) (format "%s" ,(cadr field-expr)))
- (error "unknown bibtex field type %s" field))))
- fields)
- (concat
- ,@(concat-prepare
- (-flatten
- (list (concat "@" (symbol-name name) "{,\n")
- ;; there seems to be some bug with mapcan,
- ;; so we fall back to flatten
- (mapcar (lambda (field)
- `(" " ,(symbol-name field) " = {" ,field "},\n"))
- fields)
- "}\n")))))))
- doi-utils-bibtex-type-generators))
-
-(doi-utils-def-bibtex-type article ("journal-article" "article-journal")
- author title journal year volume number pages doi url)
-
-(doi-utils-def-bibtex-type inproceedings ("proceedings-article")
- author title booktitle year month pages doi url)
-
-(doi-utils-def-bibtex-type book ("book")
- author title series publisher year pages doi url)
-#+END_SRC
-
-With the code generating the bibtex entry in place, we can glue it to the json retrieval code.
-#+BEGIN_SRC emacs-lisp :notangle doi-utils.el
+#+BEGIN_SRC emacs-lisp :tangle doi-utils.el
(defun doi-utils-doi-to-bibtex-string (doi)
"return a bibtex entry as a string for the doi. Only articles are currently supported"
- (let* ((results (doi-utils-get-json-metadata doi))
- (type (plist-get results :type)))
- (format "%s" results) ; json-data
- (or (some (lambda (g) (funcall g type results)) doi-utils-bibtex-type-generators)
- (message-box "%s not supported yet." type))))
+ (let (type
+ results
+ author
+ title
+ booktitle
+ journal
+ year
+ volume
+ number
+ pages
+ month
+ url
+ json-data)
+ (setq results (doi-utils-get-json-metadata doi)
+ json-data (format "%s" results)
+ type (plist-get results :type)
+ author (mapconcat (lambda (x) (concat (plist-get x :given) " " (plist-get x :family)))
+ (plist-get results :author) " and ")
+ title (plist-get results :title)
+ journal (plist-get results :container-title)
+ volume (plist-get results :volume)
+ issue (plist-get results :issue)
+ year (elt (elt (plist-get (plist-get results :issued) :date-parts) 0) 0)
+ pages (plist-get results :page)
+ doi (plist-get results :DOI)
+ url (plist-get results :URL))
+ (cond
+ ((or (string= type "journal-article") (string= type "article-journal"))
+ (doi-utils-expand-template "@article{,
+ author = {%{author}},
+ title = {%{title}},
+ journal = {%{journal}},
+ year = {%{year}},
+ volume = {%{volume}},
+ number = {%{issue}},
+ pages = {%{pages}},
+ doi = {%{doi}},
+ url = {%{url}},
+}"))
+
+ ((string= type "proceedings-article")
+ (setq booktitle (plist-get results :container-title))
+ (doi-utils-expand-template "@inproceedings{,
+ author = {%{author}},
+ title = {%{title}},
+ booktitle = {%{booktitle}},
+ year = {%{year}},
+ month = {%{month}},
+ pages = {%{pages}},
+ doi = {%{doi}},
+ url = {%{url}},
+}"))
+
+ (t (message-box "%s not supported yet." type)))))
#+END_SRC
#+RESULTS:
#+RESULTS:
#+begin_example
@article{,
- author = {F. Abild-Pedersen and J. Greeley and F. Studt and J. Rossmeisl and T. Munter and P. Moses and E. Skúlason and T. Bligaard and J. Nørskov},
- title = {Scaling Properties of Adsorption Energies for Hydrogen-Containing Molecules on Transition-Metal Surfaces},
- journal = {Phys. Rev. Lett.},
- year = {2007},
- volume = {99},
- number = {1},
- pages = {nil},
- doi = {10.1103/physrevlett.99.016105},
- url = {http://dx.doi.org/10.1103/PhysRevLett.99.016105},
-}
-#+end_example
-
-and for a book:
-
-#+BEGIN_SRC emacs-lisp :tangle no
-(doi-utils-doi-to-bibtex-string "10.1007/978-1-4612-4968-9")
-#+END_SRC
-
-#+RESULTS:
-#+begin_example
-@book{,
- author = {Dennis Stanton and Dennis White},
- title = {Constructive Combinatorics},
- series = {Undergraduate Texts in Mathematics},
- publisher = {Springer New York},
- year = {1986},
- pages = {nil},
- doi = {10.1007/978-1-4612-4968-9},
- url = {http://dx.doi.org/10.1007/978-1-4612-4968-9},
+ author = {F. Abild-Pedersen and J. Greeley and F. Studt and J. Rossmeisl and T. Munter and P. Moses and E. Skúlason and T. Bligaard and J. Nørskov},
+ title = {Scaling Properties of Adsorption Energies for Hydrogen-Containing Molecules on Transition-Metal Surfaces},
+ journal = {Phys. Rev. Lett.},
+ year = {2007},
+ volume = {99},
+ number = {1},
+ pages = {nil},
+ doi = {10.1103/physrevlett.99.016105},
+ url = {http://dx.doi.org/10.1103/PhysRevLett.99.016105},
}
#+end_example
projects / org-ref.git / blobdiff