removed org-ref references

[org-ref.git] / doi-utils.org

diff --git a/doi-utils.org b/doi-utils.org
index 10dbfa9b899a191c7279512400dcc302252a7587..5e539dbff3147bee8be0b3535df4e62a83255b68 100644 (file)
--- a/doi-utils.org
+++ b/doi-utils.org
@@ -551,14 +551,23 @@ org-ref, and tries to download the corresponding pdf."
 It may be you are in some other place when you want to add a bibtex entry. This next function will open the first entry in org-ref-default-bibliography go to the end, and add the entry. You can sort it later.
 
 #+BEGIN_SRC emacs-lisp :tangle doi-utils.el
 It may be you are in some other place when you want to add a bibtex entry. This next function will open the first entry in org-ref-default-bibliography go to the end, and add the entry. You can sort it later.
 
 #+BEGIN_SRC emacs-lisp :tangle doi-utils.el

-(defun doi-utils-add-bibtex-entry-from-doi (doi)
-  "add entry to end of first entry in `org-ref-default-bibliography'."
-  (interactive "sDOI: ")
-  (find-file (car org-ref-default-bibliography))
-  (end-of-buffer)
-  (insert "\n\n")
-  (doi-utils-insert-bibtex-entry-from-doi doi)
-  (save-buffer))
+(defun doi-utils-add-bibtex-entry-from-doi (doi bibfile)
+  "add entry to end of a file in `org-ref-default-bibliography' or in the current directory ending with .bib."
+  (interactive
+   (list
+    (read-string "DOI: ")
+    (ido-completing-read
+     "Bibfile: "
+     (append org-ref-default-bibliography
+            (f-entries "." (lambda (f) (f-ext? f "bib")))))))
+  (find-file bibfile)
+  (goto-char (point-min))
+  (if (search-forward doi nil t)
+      (message "%s is already in this file" doi)
+    (end-of-buffer)
+    (insert "\n\n")
+    (doi-utils-insert-bibtex-entry-from-doi doi)
+    (save-buffer)))

 #+END_SRC
 
 It may be you want to just highlight a doi, and then add it. Here is that function.
 #+END_SRC
 
 It may be you want to just highlight a doi, and then add it. Here is that function.


@@ -741,6 +750,15 @@ The idea is to add a menu to the doi link, so rather than just clicking to open
     "http://scholar.google.com/scholar?q=%s" doi)))
 
 
     "http://scholar.google.com/scholar?q=%s" doi)))
 
 

+(defun doi-utils-pubmed (doi)
+  "Pubmed the word at point or selection."
+  (interactive "sDOI: ")
+  (browse-url
+   (format
+    "http://www.ncbi.nlm.nih.gov/pubmed/?term=%s"
+    (url-hexify-string doi))))
+
+

 (defvar doi-link-menu-funcs '()
  "Functions to run in doi menu. Each entry is a list of (key menu-name function). 
 The function must take one argument, the doi.")
 (defvar doi-link-menu-funcs '()
  "Functions to run in doi menu. Each entry is a list of (key menu-name function). 
 The function must take one argument, the doi.")


@@ -751,7 +769,8 @@ The function must take one argument, the doi.")
        ("c" "iting articles" doi-utils-wos-citing)
        ("r" "elated articles" doi-utils-wos-related)
         ("s" "Google Scholar" doi-utils-google-scholar)
        ("c" "iting articles" doi-utils-wos-citing)
        ("r" "elated articles" doi-utils-wos-related)
         ("s" "Google Scholar" doi-utils-google-scholar)

-        ("f" "CrossRef DOI" doi-utils-crossref)
+        ("f" "CrossRef" doi-utils-crossref)
+        ("p" "ubmed" doi-utils-pubmed)

        ("b" "open in bibtex" doi-utils-open-bibtex)
        ("g" "et bibtex entry" doi-utils-add-bibtex-entry-from-doi)))
 
        ("b" "open in bibtex" doi-utils-open-bibtex)
        ("g" "et bibtex entry" doi-utils-add-bibtex-entry-from-doi)))
 


@@ -782,7 +801,7 @@ Options are stored in `doi-link-menu-funcs'."
  'doi-link-menu)
 #+END_SRC
 
  'doi-link-menu)
 #+END_SRC
 

-doi:10.1021/jp047349j 
+doi:10.1021/jp047349j  

 
 * end of file
 #+BEGIN_SRC emacs-lisp :tangle doi-utils.el
 
 * end of file
 #+BEGIN_SRC emacs-lisp :tangle doi-utils.el