make html export for links be to a div id.

[org-ref.git] / README.org

diff --git a/README.org b/README.org
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+# -*- org-edit-src-content-indentation: 0; -*-

 #+TITLE: org-ref: citations, cross-references, indexes, glossaries and bibtex utilities for org-mode
 
 #+TITLE: org-ref: citations, cross-references, indexes, glossaries and bibtex utilities for org-mode
 

+#+BEGIN_HTML
+<a href="https://travis-ci.org/jkitchin/org-ref"><img src="https://travis-ci.org/jkitchin/org-ref.svg?branch=master"></a>
+#+END_HTML
+

 See http://www.youtube.com/watch?v=Zya8SfmCtFA and https://www.youtube.com/watch?v=JyvpSVl4_dg for examples of org-ref in action.
 
 [[./org-ref.org]] contains all documentation and installation instructions.
 
 See http://www.youtube.com/watch?v=Zya8SfmCtFA and https://www.youtube.com/watch?v=JyvpSVl4_dg for examples of org-ref in action.
 
 [[./org-ref.org]] contains all documentation and installation instructions.
 

-[[./doi-utils.org]] contains functions for downloading bibtex entries from  a DOI, and redefines the org-mode doi link so it has more functionality. 
-
-[[./jmax-bibtex.el]] contains some utility functions:

 
 

-1. jmax-bibtex runs a menu command with actions to run on a bibtex entry including looking up the doi for the entry in a variety of places, e.g. web of science related/citing articles, Google Scholar, Pubmed, and crossref, or opening a PDF associated with the entry.
+* Installation
+We are slowly moving towards getting org-ref in MELPA. Until then, here are some directions that will probably help install org-ref.

 
 

-2. Bind M-n/M-p to next/previous bibtex entry.
+You should clone this repository somewhere.

 
 

-3. Sentence/title casing the title of a bibtex entry
+You should set these variables. Here is an example of how mine are set in an init.el file.
+#+BEGIN_SRC emacs-lisp
+(setq reftex-default-bibliography '("~/Dropbox/bibliography/references.bib"))

 
 

-4. Function to replace non-ascii characters in bibtex entries
+;; see org-ref for use of these variables
+(setq org-ref-bibliography-notes "~/Dropbox/bibliography/notes.org"
+      org-ref-default-bibliography '("~/Dropbox/bibliography/references.bib")
+      org-ref-pdf-directory "~/Dropbox/bibliography/bibtex-pdfs/")
+#+END_SRC

 
 

-5. Functions to replace journal names with @string entries, and corresponding short/long names.
+You may want to set some convenient keys for working in your bibtex file:

 
 

-To install this, add the org-ref repo directory to your load-path, and 
+#+BEGIN_SRC emacs-lisp
+(global-set-key [f10] 'org-ref-open-bibtex-notes)
+(global-set-key [f11] 'org-ref-open-bibtex-pdf)
+(global-set-key [f12] 'org-ref-open-in-browser)
+#+END_SRC

 
 

+Add the directory you cloned org-ref into to your load-path, and require the features you want.

 #+BEGIN_SRC emacs-lisp
 (add-to-list 'load-path "path-to-org-ref")
 #+BEGIN_SRC emacs-lisp
 (add-to-list 'load-path "path-to-org-ref")

+;; make sure you have dash, helm, helm-bibtex, ebib, s, f, hydra and key-chord
+;; in your load-path
+(require 'org-ref)
+
+;; optional but very useful libraries in org-ref
+(require 'doi-utils)

 (require 'jmax-bibtex)
 (require 'jmax-bibtex)

+(require 'pubmed)
+(require 'arxiv)
+(require 'sci-id)

 #+END_SRC
 #+END_SRC

+
+Please report errors here:  [[https://github.com/jkitchin/org-ref/issues][issue]]s.
+
+* Contributors
+I would like to thank the following [[https://github.com/jkitchin/org-ref/graphs/contributors][contributors]] to org-ref
+
+- https://github.com/divinenephron
+- https://github.com/OlafMerkert
+- https://github.com/prtkm
+
+And everyone who has filed an [[https://github.com/jkitchin/org-ref/issues][issue]], or asked about org-ref on the [[http://orgmode.org/community.html][org-mode Mailing list]].