From: don <don@25fa0111-c432-4dab-af88-9f31a2f6ac42>
Date: Sat, 12 Jun 2010 00:23:44 +0000 (+0000)
Subject: update kinetic formalism
X-Git-Url: https://git.donarmstrong.com/?p=ool%2Flipid_simulation_formalism.git;a=commitdiff_plain;h=2cd1cbc6407afcf9e0bf57ae85b9847463c9b124

update kinetic formalism

git-svn-id: svn+ssh://hemlock.ucr.edu/srv/svn/misc/trunk/origins_of_life@522 25fa0111-c432-4dab-af88-9f31a2f6ac42
---

diff --git a/kinetic_formalism.Rnw b/kinetic_formalism.Rnw
index 22720d9..8400db2 100644
--- a/kinetic_formalism.Rnw
+++ b/kinetic_formalism.Rnw
@@ -308,13 +308,23 @@ rate in the current formalism.
 
 \subsection{Backward adjustments ($k_{bi\mathrm{adj}}$)}
 
+Just as the forward rate constant adjustment $k_{fi\mathrm{adj}}$
+does, the backwards rate constant adjustment $k_{bi\mathrm{adj}}$
+takes into account unsaturation ($un_b$), charge ($ch_b$), curvature
+($cu_b$), length ($l_b$), and complex formation ($CF1_b$), each of
+which are modified depending on the specific specie and the vesicle
+into which the specie is entering:
+
+
 \begin{equation}
   k_{bi\mathrm{adj}} = un_b \cdot ch_b \cdot cu_b \cdot l_b \cdot CF1_b
   \label{eq:kb_adj}
 \end{equation}
 
-\newpage
 \subsubsection{Unsaturation Backward}
+
+The reverse rate of the reaction
+
 \begin{equation}
   un_b = 10^{\left|3.5^{-\left<un_\mathrm{ves}\right>}-3.5^{-un_\mathrm{monomer}}\right|}
   \label{eq:unsaturation_backward}