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2013-09-11	kdiverson	adding code for confusion matrix	commit \| commitdiff \| tree
2013-09-11	kdiverson	adding code for confusion matrix	commit \| commitdiff \| tree
2013-09-10	kdiverson	changed random forest output filename	commit \| commitdiff \| tree
2013-05-16	Kathryn Iverson	updated default parameters. These are giving better...	commit \| commitdiff \| tree
2013-05-16	Kathryn Iverson	cleaned up what is printed to screen	commit \| commitdiff \| tree
2012-11-16	Kathryn Iverson	added files for regularized random forest	commit \| commitdiff \| tree
2012-11-09	Kathryn Iverson	fixed rf memory issue in constructure	commit \| commitdiff \| tree
2012-10-26	Kathryn Iverson	restructuring random forest implementation	commit \| commitdiff \| tree
2012-10-26	Kathryn Iverson	changed random forest's inheritance	commit \| commitdiff \| tree
2012-10-26	Kathryn Iverson	added new class forest	commit \| commitdiff \| tree
2012-07-11	Kathryn Iverson	merged mgcluster. kw files added, but not working in...	commit \| commitdiff \| tree
2012-07-03	Kathryn Iverson	fixed pointers in mgcluster	commit \| commitdiff \| tree
2012-07-03	Kathryn Iverson	fixed kw parameter types	commit \| commitdiff \| tree
2012-07-03	Kathryn Iverson	updated mgcluster to take count file	commit \| commitdiff \| tree
2012-07-03	Kathryn Iverson	updated parameters for kw	commit \| commitdiff \| tree
2012-07-03	Kathryn Iverson	Merge branch 'master' of https://github.com/mothur...	commit \| commitdiff \| tree
2012-07-02	Kathryn Iverson	updated getgroupnames	commit \| commitdiff \| tree
2012-07-02	kdiverson	fixed io	commit \| commitdiff \| tree
2012-07-02	kdiverson	cleaned up code2	commit \| commitdiff \| tree
2012-06-29	kdiverson	cleaned up code	commit \| commitdiff \| tree
2012-06-28	Kathryn Iverson	updated kruskalwallis struct	commit \| commitdiff \| tree
2012-06-28	Kathryn Iverson	updated kruskalwallis struct	commit \| commitdiff \| tree
2012-06-28	Kathryn Iverson	updated kruskalwallis command	commit \| commitdiff \| tree
2012-06-26	Kathryn Iverson	added kruskalwallis command	commit \| commitdiff \| tree
2012-06-26	Kathryn Iverson	removed print statements from testing	commit \| commitdiff \| tree
2012-06-22	Kathryn Iverson	added large parameter to mgcluster along with new rabund...	commit \| commitdiff \| tree
2012-06-21	Kathryn Iverson	edited createRabund function	commit \| commitdiff \| tree
2012-06-20	Kathryn Iverson	edited createRabund function	commit \| commitdiff \| tree
2012-06-20	Kathryn Iverson	added createRabund function to mgcluster	commit \| commitdiff \| tree
2012-06-20	Kathryn Iverson	added ifelse for rabund	commit \| commitdiff \| tree
2012-06-20	Kathryn Iverson	testing new devel branch	commit \| commitdiff \| tree
2012-05-16	Kathryn Iverson	added check for numOTUS, will skip if < 2.	commit \| commitdiff \| tree
2012-05-16	Kathryn Iverson	Merge branch 'master' of https://github.com/mothur...	commit \| commitdiff \| tree
2012-05-16	Kathryn Iverson	updated output to include standard deviation	commit \| commitdiff \| tree
2012-05-16	Kathryn Iverson	replaced p-value with zscore for lookup in ztable.	commit \| commitdiff \| tree
2012-05-15	Kathryn Iverson	added functions to calculate standard deviation and...	commit \| commitdiff \| tree
2012-05-01	Kathryn Iverson	fixed sim9 and trial_swap	commit \| commitdiff \| tree
2012-04-30	Kathryn Iverson	fixed sim4	commit \| commitdiff \| tree
2012-04-30	Kathryn Iverson	added else if (matrix == "sim2") { }	commit \| commitdiff \| tree
2012-04-30	Kathryn Iverson	changed sim2 to random_shuffle	commit \| commitdiff \| tree
2012-04-30	Kathryn Iverson	added a matrix "burn in" for sim9 so that the matrix...	commit \| commitdiff \| tree
2012-04-30	Kathryn Iverson	fixed rowtotal and columntotal	commit \| commitdiff \| tree
2012-04-30	Kathryn Iverson	removed initmatrix and replaced it with co_matrix....	commit \| commitdiff \| tree
2012-04-30	Kathryn Iverson	re-wrote co-occurrence command	commit \| commitdiff \| tree
2012-04-27	Kathryn Iverson	commented out the update_row_col_totals command. Should...	commit \| commitdiff \| tree

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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