From f2d22832d127f781989c98457f42e94aea96075f Mon Sep 17 00:00:00 2001
From: pschloss <pschloss>
Date: Thu, 26 Aug 2010 11:42:23 +0000
Subject: [PATCH] took out debugging output code from distance calculators

---
 eachgapignore.h | 4 ++--
 onegapignore.h  | 4 ++--
 2 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/eachgapignore.h b/eachgapignore.h
index 8e027b7..f6824cf 100644
--- a/eachgapignore.h
+++ b/eachgapignore.h
@@ -31,14 +31,14 @@ public:
 		for(int i=0;i<alignLength;i++){
 			if(seqA[i] != '.' && seqB[i] != '.' && seqA[i] != '-' && seqB[i] != '-' ){
 				start = i;
-				cout << "start: " << start << endl;
+//				cout << "start: " << start << endl;
 				break;
 			}
 		}
 		for(int i=alignLength-1;i>=0;i--){
 			if(seqA[i] != '.' && seqB[i] != '.' && seqA[i] != '-' && seqB[i] != '-' ){
 				end = i;
-				cout << "end: " << end << endl;
+//				cout << "end: " << end << endl;
 				break;
 			}
 		}
diff --git a/onegapignore.h b/onegapignore.h
index af284fc..785272e 100644
--- a/onegapignore.h
+++ b/onegapignore.h
@@ -34,14 +34,14 @@ public:
 		for(int i=0;i<alignLength;i++){
 			if(seqA[i] != '.' && seqB[i] != '.' && seqA[i] != '-' && seqB[i] != '-' ){
 				start = i;
-				cout << "start: " << start << endl;
+//				cout << "start: " << start << endl;
 				break;
 			}
 		}
 		for(int i=alignLength-1;i>=0;i--){
 			if(seqA[i] != '.' && seqB[i] != '.' && seqA[i] != '-' && seqB[i] != '-' ){
 				end = i;
-				cout << "end: " << end << endl;
+//				cout << "end: " << end << endl;
 				break;
 			}
 		}
-- 
2.39.2