From e81e076cbba02b37cd338370aaa32acaf1407c29 Mon Sep 17 00:00:00 2001
From: westcott <westcott>
Date: Fri, 15 May 2009 14:39:11 +0000
Subject: [PATCH] fixed memory leak in collect.shared()

---
 collectsharedcommand.cpp | 2 +-
 sharedjest.cpp           | 8 +++++++-
 sharedsorest.cpp         | 6 ++++++
 3 files changed, 14 insertions(+), 2 deletions(-)

diff --git a/collectsharedcommand.cpp b/collectsharedcommand.cpp
index 4a3a338..0ac767d 100644
--- a/collectsharedcommand.cpp
+++ b/collectsharedcommand.cpp
@@ -142,7 +142,7 @@ int CollectSharedCommand::execute(){
 		util->updateGroupIndex(globaldata->Groups, globaldata->gGroupmap->groupIndex);
 
 		while(order != NULL){
-		
+
 			orderList.insert(order->getLabel());
 			
 			if(globaldata->allLines == 1 || globaldata->lines.count(count) == 1 || globaldata->labels.count(order->getLabel()) == 1){
diff --git a/sharedjest.cpp b/sharedjest.cpp
index a1b506e..1ca64b4 100644
--- a/sharedjest.cpp
+++ b/sharedjest.cpp
@@ -42,7 +42,13 @@ EstOutput Jest::getValues(vector<SharedRAbundVector*> shared) {
 		data[0] = S12[0] / (float)(S1[0] + S2[0] - S12[0]);
 		
 		if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }
-		 
+		
+		delete sharedChao;
+		delete chaoS1;
+		delete chaoS2;
+		delete chaoS1Sabund;
+		delete chaoS2Sabund;
+		
 		return data;
 	}
 	catch(exception& e) {
diff --git a/sharedsorest.cpp b/sharedsorest.cpp
index 429308f..91191d5 100644
--- a/sharedsorest.cpp
+++ b/sharedsorest.cpp
@@ -42,6 +42,12 @@ EstOutput SorEst::getValues(vector<SharedRAbundVector*> shared) {
 		 
 		if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }
 		
+		delete sharedChao;
+		delete chaoS1;
+		delete chaoS2;
+		delete chaoS1Sabund;
+		delete chaoS2Sabund;
+		
 		return data;
 	}
 	catch(exception& e) {
-- 
2.39.2