From cd4c86f68cb53017f0f98a82dd2c2e56a64c67bd Mon Sep 17 00:00:00 2001
From: pschloss <pschloss>
Date: Thu, 29 Jul 2010 06:06:22 +0000
Subject: [PATCH] another pds fix to sffinfo

---
 sffinfocommand.cpp | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sffinfocommand.cpp b/sffinfocommand.cpp
index bbfcfd4..7511a2e 100644
--- a/sffinfocommand.cpp
+++ b/sffinfocommand.cpp
@@ -410,7 +410,7 @@ int SffInfoCommand::readHeader(ifstream& in, Header& header){
 			char buffer5 [2];
 			in.read(buffer5, 2);
 			header.clipQualRight =  be_int2(*(unsigned short *)(&buffer5));
-			if(header.clipQualRight == 0){	header.clipQualRight = numBases;	}
+			if(header.clipQualRight == 0){	header.clipQualRight = header.numBases;	}
 			
 			//read clipAdapterLeft
 			char buffer6 [2];
-- 
2.39.2