From c5f38b0c83719306fd2e5a7a83e04988b1853f62 Mon Sep 17 00:00:00 2001 From: westcott Date: Wed, 9 Jun 2010 13:53:28 +0000 Subject: [PATCH] changes to blastdb to make filenames given to blast unique, changes to split.abund, fixed bugs in chimera.slayer realigner, optimized splitmatrix and modified cluster.split command. --- chimerarealigner.cpp | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/chimerarealigner.cpp b/chimerarealigner.cpp index 1da3278..0f2556a 100644 --- a/chimerarealigner.cpp +++ b/chimerarealigner.cpp @@ -24,7 +24,7 @@ void ChimeraReAligner::reAlign(Sequence* query, vector parents) { string qAligned = query->getAligned(); string newQuery = ""; - + //cout << qAligned.length() << endl; //sort parents by region start sort(parents.begin(), parents.end(), compareRegionStart); @@ -80,7 +80,7 @@ void ChimeraReAligner::reAlign(Sequence* query, vector parents) { //set query to new aligned string query->setAligned(newQuery); - + //cout << newQuery.length() << endl; //free memory for (int i = 0; i < queryParts.size(); i++) { delete queryParts[i]; } for (int i = 0; i < parentParts.size(); i++) { delete parentParts[i]; } -- 2.39.2