From 571c698f527aac519f21d20563d38ec804d59876 Mon Sep 17 00:00:00 2001
From: pschloss <pschloss>
Date: Mon, 18 Apr 2011 17:25:11 +0000
Subject: [PATCH] small fix to refchimeratest.cpp

---
 refchimeratest.cpp | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/refchimeratest.cpp b/refchimeratest.cpp
index aab17e6..7af9ecd 100644
--- a/refchimeratest.cpp
+++ b/refchimeratest.cpp
@@ -60,7 +60,7 @@ int RefChimeraTest::analyzeQuery(string queryName, string querySeq){
 	int nMera = 0;
 	string chimeraRefSeq = "";
 	
-	if(bestSequenceMismatch - minMismatchToChimera > 3 || (minMismatchToChimera == 0 && bestSequenceMismatch != 0)){
+	if(bestSequenceMismatch - minMismatchToChimera >= 3){// || (minMismatchToChimera == 0 && bestSequenceMismatch != 0)){
 	
 		nMera = 2;
 		chimeraRefSeq = stitchBimera(leftParentBi, rightParentBi, breakPointBi);
-- 
2.39.2