From 17fff150047c9ddc5f7697ab946d79a2ed009bd2 Mon Sep 17 00:00:00 2001
From: westcott <westcott>
Date: Fri, 6 May 2011 12:32:49 +0000
Subject: [PATCH] fixed template=self thing

---
 Mothur.xcodeproj/project.pbxproj | 4 ++--
 decalc.cpp                       | 4 +++-
 2 files changed, 5 insertions(+), 3 deletions(-)

diff --git a/Mothur.xcodeproj/project.pbxproj b/Mothur.xcodeproj/project.pbxproj
index 2e6f5a8..321c130 100644
--- a/Mothur.xcodeproj/project.pbxproj
+++ b/Mothur.xcodeproj/project.pbxproj
@@ -1979,7 +1979,7 @@
 				ARCHS = "$(ARCHS_STANDARD_64_BIT)";
 				DEPLOYMENT_LOCATION = NO;
 				GCC_C_LANGUAGE_STANDARD = gnu99;
-				GCC_OPTIMIZATION_LEVEL = 3;
+				GCC_OPTIMIZATION_LEVEL = 0;
 				GCC_PREPROCESSOR_DEFINITIONS = (
 					"MOTHUR_FILES=\"\\\"../release\\\"\"",
 					"VERSION=\"\\\"1.18.1\\\"\"",
@@ -2013,7 +2013,7 @@
 				GCC_C_LANGUAGE_STANDARD = gnu99;
 				GCC_GENERATE_DEBUGGING_SYMBOLS = NO;
 				GCC_MODEL_TUNING = "";
-				GCC_OPTIMIZATION_LEVEL = 3;
+				GCC_OPTIMIZATION_LEVEL = 0;
 				GCC_PREPROCESSOR_DEFINITIONS = (
 					"VERSION=\"\\\"1.18.1\\\"\"",
 					"RELEASE_DATE=\"\\\"4/15/2011\\\"\"",
diff --git a/decalc.cpp b/decalc.cpp
index c600a7f..f620382 100644
--- a/decalc.cpp
+++ b/decalc.cpp
@@ -789,7 +789,7 @@ vector<Sequence*> DeCalculator::findClosest(Sequence* querySeq, vector<Sequence*
 		float lastRight = distsRight[0].dist;
 		float lastLeft = distsLeft[0].dist;
 		//int lasti = 0;
-		for (int i = 0; i < numWanted+1; i++) {
+		for (int i = 0; i < distsLeft.size(); i++) {
 			
 			if (m->control_pressed) { return seqsMatches; }
 			
@@ -811,6 +811,8 @@ vector<Sequence*> DeCalculator::findClosest(Sequence* querySeq, vector<Sequence*
 //				cout << "loop-right\t" << db[distsRight[i].index]->getName() << '\t' << distsRight[i].dist << endl;
 			}
 			
+			if (i == numWanted) { break; }
+			
 		}
 		
 		//are we still above the minimum similarity cutoff
-- 
2.39.2