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]> git.donarmstrong.com Git - mothur.git/history - trimseqscommand.h

2014-01-09	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw
2014-01-09	Sarah Westcott	added Jensen-Shannon calc. working on get.communitytype...	blob \| commitdiff \| raw
2013-03-18	SarahsWork	Merge remote-tracking branch 'origin'	blob \| commitdiff \| raw \| diff to current
2013-03-18	SarahsWork	working on dereplicate=t issue in chimera.slayer and...	blob \| commitdiff \| raw \| diff to current
2013-03-12	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2013-03-06	SarahsWork	added pacbio parameter to fastq.info. fixed issue with...	blob \| commitdiff \| raw \| diff to current
2013-03-05	SarahsWork	Merge remote-tracking branch 'origin'	blob \| commitdiff \| raw \| diff to current
2013-03-05	SarahsWork	working on chimera.uchime change for dereplicate=t...	blob \| commitdiff \| raw \| diff to current
2013-03-02	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2013-02-27	SarahsWork	mods to resolve some misc warnings. added alignPrimer...	blob \| commitdiff \| raw \| diff to current
2013-02-07	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2013-01-29	Sarah Westcott	added get.dists and remove.dists commands. fixed bug...	blob \| commitdiff \| raw \| diff to current
2013-01-28	Sarah Westcott	added checks to make sure windows processes completed...	blob \| commitdiff \| raw \| diff to current
2013-01-03	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-12-21	Sarah Westcott	added ignore option to oligos files for make.contigs...	blob \| commitdiff \| raw \| diff to current
2012-12-13	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-12-13	Sarah Westcott	fixed bug in phylo.diversity rooting. added filename...	blob \| commitdiff \| raw \| diff to current
2012-10-22	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-10-09	Sarah Westcott	added dups parameter to chimera.uchime. working on...	blob \| commitdiff \| raw \| diff to current
2012-09-14	Sarah Westcott	added count file to trim.seqs, get.groups, get.lineage...	blob \| commitdiff \| raw \| diff to current
2012-07-30	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-06-19	Sarah Westcott	added load.logfile command. changed summary.single...	blob \| commitdiff \| raw \| diff to current
2012-06-12	Sarah Westcott	changed reading of name file to use buffered reads...	blob \| commitdiff \| raw \| diff to current
2012-06-07	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-06-05	Sarah Westcott	added forward and reverse barcodes to trim.seqs to...	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	Revert to previous commit	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	moved mothur's source into a folder to make grabbing...	blob \| commitdiff \| raw
2012-04-04	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-03-27	Sarah Westcott	added pcr.seqs command. fixed bug in rarefacftion.singl...	blob \| commitdiff \| raw \| diff to current
2012-03-13	Sarah Westcott	added unix to ifdefs. minor changes while testing 1...	blob \| commitdiff \| raw \| diff to current
2012-02-24	Sarah Westcott	paralellized trim.seqs for windows. fixed bug in trim...	blob \| commitdiff \| raw \| diff to current
2012-02-20	Sarah Westcott	removed unused copy constructors and comments within...	blob \| commitdiff \| raw \| diff to current
2011-09-13	westcott	working on windows paralellization, added trimOligos...	blob \| commitdiff \| raw \| diff to current
2011-07-18	westcott	changed normalize.shared and sub.sample commands to...	blob \| commitdiff \| raw \| diff to current
2011-06-20	westcott	added command descriptions	blob \| commitdiff \| raw \| diff to current
2011-05-18	westcott	fixed bug with trim.seqs allfiles=t	blob \| commitdiff \| raw \| diff to current
2011-05-10	westcott	added citation function to commands	blob \| commitdiff \| raw \| diff to current
2011-04-06	westcott	removed read.dist, read.otu, read.tree and globaldata...	blob \| commitdiff \| raw \| diff to current
2011-03-22	westcott	fixed trim.seqs group counts by adding back in the...	blob \| commitdiff \| raw \| diff to current
2011-03-04	westcott	worked on trim.seqs - added in the groupfiles for allfi...	blob \| commitdiff \| raw \| diff to current
2011-02-09	pschloss	mods to trim.seqs	blob \| commitdiff \| raw \| diff to current
2010-12-23	pschloss	addition of trim.flows	blob \| commitdiff \| raw \| diff to current
2010-12-20	pschloss	pat's changes to seq.error command	blob \| commitdiff \| raw \| diff to current
2010-11-22	westcott	added group option to trim.seqs so you can provide...	blob \| commitdiff \| raw \| diff to current
2010-10-15	westcott	added pipeline commands which involved change to comman...	blob \| commitdiff \| raw \| diff to current
2010-08-20	westcott	changed file divide for trim.seqs	blob \| commitdiff \| raw \| diff to current
2010-07-14	pschloss	pat's changes to trim.seqs	blob \| commitdiff \| raw \| diff to current
2010-07-14	westcott	started work on sffinfo command. fixed bug across...	blob \| commitdiff \| raw \| diff to current
2010-07-06	westcott	fixed trim.seqs bug	blob \| commitdiff \| raw \| diff to current
2010-06-30	westcott	modified trim.seqs to split by primer name if primer...	blob \| commitdiff \| raw \| diff to current
2010-05-10	westcott	worked on trim.seqs	blob \| commitdiff \| raw \| diff to current
2010-05-10	westcott	worked on trim.seqs	blob \| commitdiff \| raw \| diff to current
2010-05-10	pschloss	pds - modified strip barcode funcrtion in trimseqscommand	blob \| commitdiff \| raw \| diff to current
2010-05-07	westcott	modified trim.seqs to account for primers of different...	blob \| commitdiff \| raw \| diff to current
2010-05-07	westcott	working on trim.seqs	blob \| commitdiff \| raw \| diff to current
2010-05-07	westcott	changed groupfile in classify.seqs to reflect multiple...	blob \| commitdiff \| raw \| diff to current
2010-04-30	westcott	paralellized trim.seqs	blob \| commitdiff \| raw \| diff to current
2010-03-03	westcott	added checks for ^C to quit command instead of program	blob \| commitdiff \| raw \| diff to current
2010-01-26	westcott	added set.dir command and modified commands to redirect...	blob \| commitdiff \| raw \| diff to current
2009-11-02	westcott	added groups option to read.otu, added qtrim option...	blob \| commitdiff \| raw \| diff to current
2009-06-18	pschloss	added an alignreport option to screen seqs	blob \| commitdiff \| raw \| diff to current
2009-06-14	pschloss	merged pat's trim seqs edits with sarah's major overhau...	blob \| commitdiff \| raw \| diff to current
2009-06-12	westcott	broke up globaldata and moved error checking and help...	blob \| commitdiff \| raw \| diff to current
2009-06-08	pschloss	added some features to trim.seqs	blob \| commitdiff \| raw \| diff to current
2009-06-07	pschloss	modified trim.seqs command	blob \| commitdiff \| raw \| diff to current
2009-06-06	pschloss	added trim.seqs command	blob \| commitdiff \| raw \| diff to current

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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