git.donarmstrong.com Git - mothur.git/history

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2013-04-03	SarahsWork	added name, group and count files to chop.seqs. added...	blob \| commitdiff \| raw
2012-10-22	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-09-07	Sarah Westcott	major change to the tree class to use the count table...	blob \| commitdiff \| raw \| diff to current
2012-05-14	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-05-11	Sarah Westcott	fixed path redirect issue in shhh.flows. optimized...	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	fixed segfault in unifrac with subsample. in progress...	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	Revert to previous commit	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	moved mothur's source into a folder to make grabbing...	blob \| commitdiff \| raw
2012-05-01	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-04-13	Sarah Westcott	added tree reader class to handle reading trees. Rewor...	blob \| commitdiff \| raw \| diff to current
2012-04-11	Sarah Westcott	added subsample and consensus parameters to unifrac...	blob \| commitdiff \| raw \| diff to current
2011-04-06	westcott	removed read.dist, read.otu, read.tree and globaldata...	blob \| commitdiff \| raw \| diff to current
2010-12-03	westcott	fixed indicator command bug	blob \| commitdiff \| raw \| diff to current
2010-11-19	westcott	added indicator command	blob \| commitdiff \| raw \| diff to current
2010-08-30	westcott	sped up unifrac weighted.	blob \| commitdiff \| raw \| diff to current
2010-08-27	westcott	made read.tree not require a groupfile, if one is not...	blob \| commitdiff \| raw \| diff to current
2010-06-14	westcott	fixed read.tree so that it can read trees generated...	blob \| commitdiff \| raw \| diff to current
2010-06-09	westcott	changes to blastdb to make filenames given to blast...	blob \| commitdiff \| raw \| diff to current
2010-03-03	westcott	added checks for ^C to quit command instead of program	blob \| commitdiff \| raw \| diff to current
2010-02-26	westcott	created mothurOut class to handle logfiles	blob \| commitdiff \| raw \| diff to current
2010-02-12	westcott	working on chimeras	blob \| commitdiff \| raw \| diff to current
2010-02-03	westcott	added name option to read.tree for use in unifrac and...	blob \| commitdiff \| raw \| diff to current
2009-08-01	westcott	bugs fixes while testing for 1.5 release	blob \| commitdiff \| raw \| diff to current
2009-06-14	pschloss	merged pat's trim seqs edits with sarah's major overhau...	blob \| commitdiff \| raw \| diff to current
2009-06-12	westcott	broke up globaldata and moved error checking and help...	blob \| commitdiff \| raw \| diff to current
2009-06-04	westcott	fixed some bugs	blob \| commitdiff \| raw \| diff to current
2009-05-27	westcott	fixed multiple bugs for 1.4 release	blob \| commitdiff \| raw \| diff to current
2009-05-07	westcott	fixed concensus command and modified tree class so...	blob \| commitdiff \| raw \| diff to current
2009-04-20	pschloss	pds fixes of heatmap and some other minor stuff	blob \| commitdiff \| raw \| diff to current
2009-04-17	westcott	added bootstrap.shared command and fixed some bugs...	blob \| commitdiff \| raw \| diff to current
2009-04-06	westcott	fixed memory leak in parsimony calculator and added...	blob \| commitdiff \| raw \| diff to current
2009-03-06	westcott	fixed bug in read tree	blob \| commitdiff \| raw \| diff to current
2009-03-05	westcott	working on readtree	blob \| commitdiff \| raw \| diff to current
2009-03-02	westcott	worked on unifrac.unweighted()	blob \| commitdiff \| raw \| diff to current
2009-02-26	westcott	parsimony with groups	blob \| commitdiff \| raw \| diff to current
2009-02-26	westcott	weightedcommand	blob \| commitdiff \| raw \| diff to current
2009-02-24	pschloss	print tree debugger	blob \| commitdiff \| raw \| diff to current
2009-02-23	westcott	fixed parsimony for groups	blob \| commitdiff \| raw \| diff to current
2009-02-20	westcott	fixed unweighted calculator	blob \| commitdiff \| raw \| diff to current
2009-02-13	westcott	added read.shared, broke up globaldata a bit	blob \| commitdiff \| raw \| diff to current
2009-02-11	westcott	adding treeclimber and unifrac pieces	blob \| commitdiff \| raw \| diff to current
2009-01-30	pschloss	When Pat tried to compile mothur in Ubuntu linux, there...	blob \| commitdiff \| raw \| diff to current
2009-01-26	westcott	fixed summary.shared bug and set jumble default to 1.	blob \| commitdiff \| raw \| diff to current
2009-01-23	westcott	fixed bug in sharedcommand and parselistcommand and...	blob \| commitdiff \| raw \| diff to current

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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