git.donarmstrong.com Git - mothur.git/history

]> git.donarmstrong.com Git - mothur.git/history - seqsummarycommand.cpp

2013-09-04	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw
2013-08-14	Sarah Westcott	Merge remote-tracking branch 'origin'	blob \| commitdiff \| raw
2013-08-02	Sarah Westcott	Merge remote-tracking branch 'origin'	blob \| commitdiff \| raw
2013-07-18	Sarah Westcott	added adjust parameter to mgcluster. fixed bug in class...	blob \| commitdiff \| raw
2013-04-22	SarahsWork	added flag to count table read so that commands that...	blob \| commitdiff \| raw \| diff to current
2013-04-19	SarahsWork	added mothurOutJustToScreen function and changed all...	blob \| commitdiff \| raw \| diff to current
2013-04-19	SarahsWork	paralellized unifrac.weighted for windows. added get...	blob \| commitdiff \| raw \| diff to current
2013-04-05	SarahsWork	added method parameter to get.oturep. options method...	blob \| commitdiff \| raw \| diff to current
2013-02-07	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2013-01-28	Sarah Westcott	added checks to make sure windows processes completed...	blob \| commitdiff \| raw \| diff to current
2012-12-13	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-12-13	Sarah Westcott	fixed bug in phylo.diversity rooting. added filename...	blob \| commitdiff \| raw \| diff to current
2012-11-06	Sarah Westcott	changed added group output to indicator command. a...	blob \| commitdiff \| raw \| diff to current
2012-10-22	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-10-22	Sarah Westcott	added sets to amova and homova commands. added oligos...	blob \| commitdiff \| raw \| diff to current
2012-10-22	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-09-14	Sarah Westcott	added count file to trim.seqs, get.groups, get.lineage...	blob \| commitdiff \| raw \| diff to current
2012-08-13	Sarah Westcott	added count file to chimera.uchime. found issue with...	blob \| commitdiff \| raw \| diff to current
2012-07-30	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-06-19	Sarah Westcott	added load.logfile command. changed summary.single...	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	Revert to previous commit	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	moved mothur's source into a folder to make grabbing...	blob \| commitdiff \| raw
2012-05-01	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-04-23	Sarah Westcott	bugs found while testing	blob \| commitdiff \| raw \| diff to current
2012-04-04	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-03-13	Sarah Westcott	added unix to ifdefs. minor changes while testing 1...	blob \| commitdiff \| raw \| diff to current
2012-02-28	Sarah Westcott	fixed bug in windows summary.seqs and summary.qual...	blob \| commitdiff \| raw \| diff to current
2012-02-24	Sarah Westcott	paralellized screen.seqs for windows.	blob \| commitdiff \| raw \| diff to current
2012-01-19	westcott	fixed bug with shhh.flow from file path name in write...	blob \| commitdiff \| raw \| diff to current
2012-01-04	westcott	1.23.0	blob \| commitdiff \| raw \| diff to current
2011-09-21	westcott	finished added bygroup processing of chimeras in chimer...	blob \| commitdiff \| raw \| diff to current
2011-09-13	westcott	working on windows paralellization, added trimOligos...	blob \| commitdiff \| raw \| diff to current
2011-08-03	westcott	added paralellization for windows to dist.seqs and...	blob \| commitdiff \| raw \| diff to current
2011-07-15	westcott	rewrote metastats command in c++, added mothurRemove...	blob \| commitdiff \| raw \| diff to current
2011-06-14	westcott	working on current change	blob \| commitdiff \| raw \| diff to current
2011-05-16	westcott	added chimera.uchime	blob \| commitdiff \| raw \| diff to current
2011-05-10	westcott	added citation function to commands	blob \| commitdiff \| raw \| diff to current
2011-04-06	westcott	added getCommandInfoCommand for gui	blob \| commitdiff \| raw \| diff to current
2011-04-06	westcott	removed read.dist, read.otu, read.tree and globaldata...	blob \| commitdiff \| raw \| diff to current
2011-03-11	westcott	added summary outputs for align.check	blob \| commitdiff \| raw \| diff to current
2011-03-11	westcott	added namefile to align.check and added seqs from namef...	blob \| commitdiff \| raw \| diff to current
2011-03-11	westcott	added namefile to summary.seqs	blob \| commitdiff \| raw \| diff to current
2011-02-08	westcott	added [ERROR] flag if command aborts	blob \| commitdiff \| raw \| diff to current
2010-11-05	westcott	cluster.split fix	blob \| commitdiff \| raw \| diff to current
2010-10-26	westcott	fixes while testing	blob \| commitdiff \| raw \| diff to current
2010-10-15	westcott	added pipeline commands which involved change to comman...	blob \| commitdiff \| raw \| diff to current
2010-09-17	westcott	bug fixes	blob \| commitdiff \| raw \| diff to current
2010-09-16	westcott	initial add of metastats	blob \| commitdiff \| raw \| diff to current
2010-08-24	westcott	moved utilities out of mothur.h and into mothurOut...	blob \| commitdiff \| raw \| diff to current
2010-08-23	westcott	numSeqs passing fix	blob \| commitdiff \| raw \| diff to current
2010-08-19	westcott	changed how we break up the files on parallelized comma...	blob \| commitdiff \| raw \| diff to current
2010-07-28	westcott	some bug fixes	blob \| commitdiff \| raw \| diff to current
2010-07-14	westcott	started work on sffinfo command. fixed bug across...	blob \| commitdiff \| raw \| diff to current
2010-06-15	westcott	changed how we count sequences in a fastafile to allow...	blob \| commitdiff \| raw \| diff to current
2010-06-15	westcott	final commit before testing 1.11	blob \| commitdiff \| raw \| diff to current
2010-05-20	westcott	added cluster.split command	blob \| commitdiff \| raw \| diff to current
2010-05-14	westcott	1.10.0	blob \| commitdiff \| raw \| diff to current
2010-04-29	westcott	paralellized summary.seqs and added mpi code to it.	blob \| commitdiff \| raw \| diff to current
2010-03-03	westcott	added checks for ^C to quit command instead of program	blob \| commitdiff \| raw \| diff to current
2010-02-26	westcott	created mothurOut class to handle logfiles	blob \| commitdiff \| raw \| diff to current
2010-01-26	westcott	added set.dir command and modified commands to redirect...	blob \| commitdiff \| raw \| diff to current
2009-12-02	westcott	modified sequence class to read fasta files with commen...	blob \| commitdiff \| raw \| diff to current
2009-11-13	westcott	finished work on classify.seqs bayesian method and...	blob \| commitdiff \| raw \| diff to current
2009-06-25	westcott	added logfile feature	blob \| commitdiff \| raw \| diff to current
2009-06-18	westcott	fixed some bugs	blob \| commitdiff \| raw \| diff to current
2009-06-14	pschloss	merged pat's trim seqs edits with sarah's major overhau...	blob \| commitdiff \| raw \| diff to current
2009-06-12	westcott	broke up globaldata and moved error checking and help...	blob \| commitdiff \| raw \| diff to current
2009-06-06	pschloss	added trim.seqs command	blob \| commitdiff \| raw \| diff to current
2009-06-04	westcott	removed readseqs, readfasta, readnexus, readclustal...	blob \| commitdiff \| raw \| diff to current
2009-06-04	pschloss	pat's edits of screen.seqs and summary.seqs	blob \| commitdiff \| raw \| diff to current
2009-06-03	pschloss	added screen.seqs command - pds	blob \| commitdiff \| raw \| diff to current
2009-06-03	pschloss	addition of summary.seq command [pds]	blob \| commitdiff \| raw \| diff to current

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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