| 2013-04-19 |
SarahsWork | added mothurOutJustToScreen function and changed all... |
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| 2013-04-05 |
SarahsWork | added method parameter to get.oturep. options method... |
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| 2013-04-01 |
SarahsWork | added end of file character to some type type reads... |
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| 2013-03-02 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2013-02-18 |
SarahsWork | linux screen.seqs segfault |
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| 2013-02-07 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2013-02-06 |
Sarah Westcott | added *.count.summary file to count.groups command... |
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| 2013-01-28 |
Sarah Westcott | added checks to make sure windows processes completed... |
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| 2013-01-25 |
Sarah Westcott | added primer.design command. fixed bug with linux... |
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| 2012-12-13 |
Sarah Westcott | Merge remote-tracking branch 'origin/master' |
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| 2012-12-13 |
Sarah Westcott | fixed bug in phylo.diversity rooting. added filename... |
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| 2012-10-22 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2012-10-02 |
Sarah Westcott | added classify.shared command and random forest files... |
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| 2012-09-25 |
Sarah Westcott | added count file to get.oturep, pre.cluster, screen... |
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| 2012-07-30 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2012-07-30 |
Sarah Westcott | fixed subsample name file name issue. added count... |
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| 2012-06-19 |
Sarah Westcott | added load.logfile command. changed summary.single... |
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| 2012-05-02 |
Sarah Westcott | Revert to previous commit |
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| 2012-05-02 |
Sarah Westcott | moved mothur's source into a folder to make grabbing... |
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| 2012-04-04 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2012-03-27 |
Sarah Westcott | added pcr.seqs command. fixed bug in rarefacftion.singl... |
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| 2012-03-13 |
Sarah Westcott | added unix to ifdefs. minor changes while testing 1... |
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| 2012-02-28 |
Sarah Westcott | fixed bug in windows summary.seqs and summary.qual... |
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| 2012-02-24 |
Sarah Westcott | paralellized screen.seqs for windows. |
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| 2012-01-19 |
westcott | fixed bug with shhh.flow from file path name in write... |
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| 2012-01-04 |
westcott | 1.23.0 |
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| 2011-12-06 |
westcott | metastats in progress |
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| 2011-11-28 |
westcott | added fontsize to heatmap.sim, paralellized chimera... |
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| 2011-11-14 |
westcott | finished shhh.seqs command, fixed bug with remove.group... |
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| 2011-09-13 |
westcott | working on windows paralellization, added trimOligos... |
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| 2011-07-15 |
westcott | rewrote metastats command in c++, added mothurRemove... |
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| 2011-06-14 |
westcott | working on current change |
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| 2011-05-10 |
westcott | added citation function to commands |
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| 2011-04-26 |
westcott | added current as option is lists of file names, process... |
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| 2011-04-06 |
westcott | added getCommandInfoCommand for gui |
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| 2011-04-06 |
westcott | removed read.dist, read.otu, read.tree and globaldata... |
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| 2011-03-16 |
westcott | added set.current and get.current commands and modified... |
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| 2011-03-11 |
westcott | added summary outputs for align.check |
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| 2011-03-11 |
westcott | added namefile to align.check and added seqs from namef... |
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| 2011-02-08 |
westcott | added [ERROR] flag if command aborts |
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| 2011-01-07 |
westcott | working on chimera change to add trim feature, fixed... |
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| 2010-11-08 |
westcott | changes to dist.seqs and pairwise.seqs and cluster... |
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| 2010-11-05 |
westcott | cluster.split fix |
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| 2010-10-26 |
westcott | done testing 1.14.0 |
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| 2010-10-26 |
westcott | fixes while testing |
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| 2010-10-15 |
westcott | added pipeline commands which involved change to comman... |
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| 2010-09-17 |
westcott | bug fixes |
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| 2010-09-16 |
westcott | initial add of metastats |
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| 2010-09-15 |
westcott | added normalize.shared command |
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| 2010-08-26 |
westcott | added clearcut source to mothur, fixed mislabeled share... |
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| 2010-08-24 |
westcott | moved utilities out of mothur.h and into mothurOut... |
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| 2010-08-23 |
westcott | numSeqs passing fix |
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| 2010-08-19 |
westcott | changed how we break up the files on parallelized comma... |
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| 2010-07-28 |
westcott | some bug fixes |
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| 2010-07-14 |
westcott | started work on sffinfo command. fixed bug across... |
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| 2010-06-15 |
westcott | changed how we count sequences in a fastafile to allow... |
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| 2010-05-20 |
westcott | added cluster.split command |
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| 2010-04-29 |
westcott | paralellized summary.seqs and added mpi code to it. |
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| 2010-04-29 |
westcott | paralellized screen.seqs and added mpi code to it.... |
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| 2010-03-03 |
westcott | added checks for ^C to quit command instead of program |
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| 2010-02-26 |
westcott | created mothurOut class to handle logfiles |
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| 2010-01-26 |
westcott | added set.dir command and modified commands to redirect... |
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| 2010-01-19 |
pschloss | pat's mods to morisitahorn and pre.cluster |
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| 2009-12-02 |
westcott | modified sequence class to read fasta files with commen... |
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| 2009-10-29 |
westcott | added hcluster command and fixed some bugs, namely... |
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| 2009-06-25 |
westcott | added logfile feature |
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| 2009-06-21 |
pschloss | This is v.1.4.0 |
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| 2009-06-19 |
westcott | version working on mac with .tellg changed to unget... |
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| 2009-06-18 |
westcott | fixed some bugs |
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| 2009-06-18 |
pschloss | added an alignreport option to screen seqs |
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| 2009-06-16 |
pschloss | a few minor things - pds |
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| 2009-06-14 |
pschloss | merged pat's trim seqs edits with sarah's major overhau... |
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| 2009-06-12 |
westcott | broke up globaldata and moved error checking and help... |
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| 2009-06-06 |
pschloss | added trim.seqs command |
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| 2009-06-06 |
pschloss | added reverse.seqs command |
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| 2009-06-04 |
westcott | removed readseqs, readfasta, readnexus, readclustal... |
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| 2009-06-04 |
pschloss | pat's edits of screen.seqs and summary.seqs |
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| 2009-06-03 |
pschloss | added screen.seqs command - pds |
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projects / mothur.git / history