]> git.donarmstrong.com Git - mothur.git/history - phylotree.cpp
changing command name classify.shared to classifyrf.shared
[mothur.git] / phylotree.cpp
2013-01-08 Sarah Westcottadded dereplicate parameter to chimera.slayer and chime...
2012-10-22 Pat SchlossMerge remote-tracking branch 'mothur/master'
2012-09-12 Sarah Westcottoptimizing classify.seqs calculating of template probab...
2012-09-11 Sarah Westcottadded count file to get.groups and remove.groups. added...
2012-07-30 Pat SchlossMerge remote-tracking branch 'mothur/master'
2012-06-19 Sarah Westcottadded load.logfile command. changed summary.single...
2012-05-31 Pat SchlossMerge remote-tracking branch 'mothur/master'
2012-05-22 Sarah Westcottadded debug output classify.seqs. worked on make.contig...
2012-05-02 Sarah WestcottRevert to previous commit
2012-05-02 Sarah Westcottmoved mothur's source into a folder to make grabbing...
2012-04-04 Pat SchlossMerge remote-tracking branch 'mothur/master'
2012-04-03 Sarah Westcottworking on adding subsampling to dist.shared. fixed...
2012-01-19 westcottfixed bug with shhh.flow from file path name in write...
2011-12-23 westcottadded qvalues to metastats. fixed bug with chimera...
2011-10-26 westcottparalellized chimera.uchime for windows for both by...
2011-09-13 westcottworking on windows paralellization, added trimOligos...
2011-01-05 westcottremoved various build warnings
2010-08-24 westcottmoved utilities out of mothur.h and into mothurOut...
2010-08-06 westcottadded versioning info to all shortcut files mothur...
2010-08-05 westcottfixed bug with creation of .tree.sum file
2010-07-30 westcottchanges for 1.12.2
2010-07-14 westcottstarted work on sffinfo command. fixed bug across...
2010-06-22 westcottfinished get.relabund command
2010-06-16 westcottfixes while testing
2010-05-27 westcottchanges to chop.seqs
2010-05-20 westcottadded cluster.split command
2010-05-05 westcottfilled out reference taxonomy with "unclassified" so...
2010-04-29 westcottparalellized screen.seqs and added mpi code to it....
2010-04-27 westcottreworked the classifiers summary file added groupfile...
2010-04-26 westcottmade classifier faster
2010-04-14 westcottsome changes while testing 1.9
2010-02-26 westcottcreated mothurOut class to handle logfiles
2010-01-12 westcottworked on hcluster. made .single command run using...
2010-01-05 westcottyou can now use a distance matrix as input for the...
2009-11-23 westcottadded phylotype command which reads a taxonomy file...