git.donarmstrong.com Git - mothur.git/history

]> git.donarmstrong.com Git - mothur.git/history - mothur.cpp

2012-05-02	Sarah Westcott	Revert to previous commit	blob \| commitdiff \| raw
2012-05-02	Sarah Westcott	moved mothur's source into a folder to make grabbing...	blob \| commitdiff \| raw
2012-04-04	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw
2012-03-13	Sarah Westcott	added unix to ifdefs. minor changes while testing 1...	blob \| commitdiff \| raw
2011-07-15	westcott	rewrote metastats command in c++, added mothurRemove...	blob \| commitdiff \| raw \| diff to current
2011-07-06	westcott	added save parameter to align.seqs, chimera commands...	blob \| commitdiff \| raw \| diff to current
2011-04-25	westcott	minor bug in chimera maligner	blob \| commitdiff \| raw \| diff to current
2011-04-15	westcott	1.18.1	blob \| commitdiff \| raw \| diff to current
2011-04-11	westcott	1.18.0	blob \| commitdiff \| raw \| diff to current
2011-04-11	westcott	fixed sub.sample groups bug	blob \| commitdiff \| raw \| diff to current
2011-04-06	westcott	removed read.dist, read.otu, read.tree and globaldata...	blob \| commitdiff \| raw \| diff to current
2010-08-26	westcott	added clearcut source to mothur, fixed mislabeled share...	blob \| commitdiff \| raw \| diff to current
2010-08-24	westcott	moved utilities out of mothur.h and into mothurOut...	blob \| commitdiff \| raw \| diff to current
2010-08-06	westcott	added versioning info to all shortcut files mothur...	blob \| commitdiff \| raw \| diff to current
2010-07-30	westcott	changes for 1.12.2	blob \| commitdiff \| raw \| diff to current
2010-07-29	westcott	1.12.1	blob \| commitdiff \| raw \| diff to current
2010-07-22	westcott	fixes while testing 1.12.0	blob \| commitdiff \| raw \| diff to current
2010-07-20	westcott	added tempdefault to set.dir and fixed bug with padding...	blob \| commitdiff \| raw \| diff to current
2010-07-19	westcott	added compile time default path	blob \| commitdiff \| raw \| diff to current
2010-07-14	westcott	started work on sffinfo command. fixed bug across...	blob \| commitdiff \| raw \| diff to current
2010-06-17	westcott	changes for 1.11	blob \| commitdiff \| raw \| diff to current
2010-05-27	westcott	changes to chop.seqs	blob \| commitdiff \| raw \| diff to current
2010-05-14	westcott	1.10.0	blob \| commitdiff \| raw \| diff to current
2010-05-10	pschloss	pds - modified strip barcode funcrtion in trimseqscommand	blob \| commitdiff \| raw \| diff to current
2010-04-28	westcott	added set.logfile command	blob \| commitdiff \| raw \| diff to current
2010-04-16	westcott	1.9	blob \| commitdiff \| raw \| diff to current
2010-04-14	westcott	some changes while testing 1.9	blob \| commitdiff \| raw \| diff to current
2010-03-16	westcott	modified mpi code to save ram by writing out every...	blob \| commitdiff \| raw \| diff to current
2010-03-12	westcott	added MPI to dist.seqs command	blob \| commitdiff \| raw \| diff to current
2010-03-11	westcott	testing mpi	blob \| commitdiff \| raw \| diff to current
2010-03-03	westcott	added checks for ^C to quit command instead of program	blob \| commitdiff \| raw \| diff to current
2010-03-01	westcott	adding mothurout.h and .cpp to repo	blob \| commitdiff \| raw \| diff to current
2010-02-26	westcott	created mothurOut class to handle logfiles	blob \| commitdiff \| raw \| diff to current
2010-02-22	westcott	chimeras, fix to sabundvector and sharedsabundvector...	blob \| commitdiff \| raw \| diff to current
2010-02-12	westcott	working on chimeras	blob \| commitdiff \| raw \| diff to current
2010-02-02	westcott	fixed bugs for 1.8	blob \| commitdiff \| raw \| diff to current
2010-01-27	westcott	added distance search method to classify.seqs	blob \| commitdiff \| raw \| diff to current
2010-01-26	westcott	added set.dir command and modified commands to redirect...	blob \| commitdiff \| raw \| diff to current
2010-01-26	pschloss	pat's edits from 1/26/2010	blob \| commitdiff \| raw \| diff to current
2010-01-19	westcott	added warning about average neighbor merges around...	blob \| commitdiff \| raw \| diff to current
2009-12-09	westcott	added sorted parameter to get.oturep, added error check...	blob \| commitdiff \| raw \| diff to current
2009-12-08	westcott	added list parameter to get.seqs and remove.seqs and...	blob \| commitdiff \| raw \| diff to current
2009-12-02	westcott	modified sequence class to read fasta files with commen...	blob \| commitdiff \| raw \| diff to current
2009-11-24	pschloss	fixed splash page citation	blob \| commitdiff \| raw \| diff to current
2009-11-23	westcott	updated phylotype command	blob \| commitdiff \| raw \| diff to current
2009-11-17	westcott	final fixes for 1.7	blob \| commitdiff \| raw \| diff to current
2009-09-28	westcott	started adding chimeraslayer method and fixed minor...	blob \| commitdiff \| raw \| diff to current
2009-09-15	westcott	fixed some issues while testing 1.6	blob \| commitdiff \| raw \| diff to current
2009-09-02	westcott	updated pats contact and mothur header info	blob \| commitdiff \| raw \| diff to current
2009-08-13	westcott	last changes before move	blob \| commitdiff \| raw \| diff to current
2009-07-26	westcott	fixed bug with aligner in database class, worked on...	blob \| commitdiff \| raw \| diff to current
2009-06-29	westcott	fixed bug in bootstrap command that was caused by globa...	blob \| commitdiff \| raw \| diff to current
2009-06-29	westcott	modified read.otu and shared command	blob \| commitdiff \| raw \| diff to current
2009-06-25	westcott	added logfile feature	blob \| commitdiff \| raw \| diff to current
2009-06-16	westcott	fixed some bugs and added scriptengine	blob \| commitdiff \| raw \| diff to current
2009-06-04	westcott	fixed some bugs	blob \| commitdiff \| raw \| diff to current
2009-05-21	westcott	fixed blast code path problem	blob \| commitdiff \| raw \| diff to current
2009-04-14	westcott	started shared utilities, updates to venn and heatmap...	blob \| commitdiff \| raw \| diff to current
2009-03-23	westcott	put back no command and worked on libshuff	blob \| commitdiff \| raw \| diff to current
2009-02-26	westcott	weightedcommand	blob \| commitdiff \| raw \| diff to current
2009-02-19	westcott	added mothur.h and fixed includes in many files	blob \| commitdiff \| raw \| diff to current
2009-01-16	westcott	Initial revision	blob \| commitdiff \| raw \| diff to current

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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