git.donarmstrong.com Git - mothur.git/history

]> git.donarmstrong.com Git - mothur.git/history - mgclustercommand.cpp

2014-01-08	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw
2013-10-17	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw
2013-10-17	Sarah Westcott	adding labels to list file.	blob \| commitdiff \| raw
2013-10-08	Sarah Westcott	added otulabels to heatmap.bin. made OTUlabels “smarter...	blob \| commitdiff \| raw \| diff to current
2013-08-14	Sarah Westcott	Merge remote-tracking branch 'origin'	blob \| commitdiff \| raw \| diff to current
2013-07-19	Pat Schloss	Update mgcluster to use dist=1 for missing distances...	blob \| commitdiff \| raw \| diff to current
2013-07-18	Sarah Westcott	added adjust parameter to mgcluster. fixed bug in class...	blob \| commitdiff \| raw \| diff to current
2013-07-17	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2013-06-13	Sarah Westcott	mgcluster with count file needed to create a nameMap...	blob \| commitdiff \| raw \| diff to current
2013-04-22	SarahsWork	added flag to count table read so that commands that...	blob \| commitdiff \| raw \| diff to current
2013-01-08	Sarah Westcott	added dereplicate parameter to chimera.slayer and chime...	blob \| commitdiff \| raw \| diff to current
2012-12-14	Sarah Westcott	added warning to readBlast to warn about duplicate...	blob \| commitdiff \| raw \| diff to current
2012-12-13	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-12-13	Sarah Westcott	fixed bug in phylo.diversity rooting. added filename...	blob \| commitdiff \| raw \| diff to current
2012-10-22	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-09-11	Sarah Westcott	added count file to get.groups and remove.groups. added...	blob \| commitdiff \| raw \| diff to current
2012-07-30	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-07-30	Sarah Westcott	fixed subsample name file name issue. added count...	blob \| commitdiff \| raw \| diff to current
2012-07-27	Sarah Westcott	added sparseDistanceMatrix class. Modified cluster...	blob \| commitdiff \| raw \| diff to current
2012-07-11	Sarah Westcott	working on adding count file to mgcluster	blob \| commitdiff \| raw \| diff to current
2012-07-11	Sarah Westcott	working on mgcluster count file change	blob \| commitdiff \| raw \| diff to current
2012-07-11	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-07-11	Kathryn Iverson	merged mgcluster. kw files added, but not working in...	blob \| commitdiff \| raw \| diff to current
2012-07-10	Sarah Westcott	changes while testing 1.26	blob \| commitdiff \| raw \| diff to current
2012-07-03	Kathryn Iverson	fixed pointers in mgcluster	blob \| commitdiff \| raw \| diff to current
2012-07-03	Kathryn Iverson	updated mgcluster to take count file	blob \| commitdiff \| raw \| diff to current
2012-06-26	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-06-26	Kathryn Iverson	removed print statements from testing	blob \| commitdiff \| raw \| diff to current
2012-06-22	Kathryn Iverson	added large parameter to mgcluster along with new rabun...	blob \| commitdiff \| raw \| diff to current
2012-06-22	kiverson	removed comments	blob \| commitdiff \| raw \| diff to current
2012-06-21	Kathryn Iverson	edited createRabund function	blob \| commitdiff \| raw \| diff to current
2012-06-20	Kathryn Iverson	edited createRabund function	blob \| commitdiff \| raw \| diff to current
2012-06-20	Kathryn Iverson	added createRabund function to mgcluster	blob \| commitdiff \| raw \| diff to current
2012-06-20	Kathryn Iverson	added ifelse for rabund	blob \| commitdiff \| raw \| diff to current
2012-06-20	Kathryn Iverson	testing new devel branch	blob \| commitdiff \| raw \| diff to current
2012-06-19	Sarah Westcott	added load.logfile command. changed summary.single...	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	Revert to previous commit	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	moved mothur's source into a folder to make grabbing...	blob \| commitdiff \| raw
2012-01-04	westcott	1.23.0	blob \| commitdiff \| raw \| diff to current
2011-07-15	westcott	rewrote metastats command in c++, added mothurRemove...	blob \| commitdiff \| raw \| diff to current
2011-06-21	westcott	added cutoff change to mgcluster	blob \| commitdiff \| raw \| diff to current
2011-06-14	westcott	working on current change	blob \| commitdiff \| raw \| diff to current
2011-05-10	westcott	added citation function to commands	blob \| commitdiff \| raw \| diff to current
2011-04-11	westcott	1.18.0	blob \| commitdiff \| raw \| diff to current
2011-04-06	westcott	added getCommandInfoCommand for gui	blob \| commitdiff \| raw \| diff to current
2011-04-06	westcott	removed read.dist, read.otu, read.tree and globaldata...	blob \| commitdiff \| raw \| diff to current
2011-03-16	westcott	added set.current and get.current commands and modified...	blob \| commitdiff \| raw \| diff to current
2011-02-08	westcott	added [ERROR] flag if command aborts	blob \| commitdiff \| raw \| diff to current
2010-10-26	westcott	fixes while testing	blob \| commitdiff \| raw \| diff to current
2010-10-15	westcott	added pipeline commands which involved change to comman...	blob \| commitdiff \| raw \| diff to current
2010-08-24	westcott	moved utilities out of mothur.h and into mothurOut...	blob \| commitdiff \| raw \| diff to current
2010-07-23	westcott	1.12.0	blob \| commitdiff \| raw \| diff to current
2010-07-22	westcott	fixes while testing 1.12.0	blob \| commitdiff \| raw \| diff to current
2010-06-28	westcott	added groups option to get.oturep command	blob \| commitdiff \| raw \| diff to current
2010-06-24	westcott	created blank accnos in chimera commands if no seqs...	blob \| commitdiff \| raw \| diff to current
2010-06-23	westcott	fixed cluster.split with average method	blob \| commitdiff \| raw \| diff to current
2010-05-28	westcott	changed hard parameter in cluster commands	blob \| commitdiff \| raw \| diff to current
2010-04-14	westcott	some changes while testing 1.9	blob \| commitdiff \| raw \| diff to current
2010-03-03	westcott	added checks for ^C to quit command instead of program	blob \| commitdiff \| raw \| diff to current
2010-02-26	westcott	created mothurOut class to handle logfiles	blob \| commitdiff \| raw \| diff to current
2010-02-23	westcott	added warning about merging with something above cutoff...	blob \| commitdiff \| raw \| diff to current
2010-02-23	westcott	added warning about merging with something above cutoff...	blob \| commitdiff \| raw \| diff to current
2010-01-26	westcott	added set.dir command and modified commands to redirect...	blob \| commitdiff \| raw \| diff to current
2010-01-19	westcott	added warning about average neighbor merges around...	blob \| commitdiff \| raw \| diff to current
2010-01-12	westcott	worked on hcluster. made .single command run using...	blob \| commitdiff \| raw \| diff to current
2009-12-23	westcott	precluster command finished	blob \| commitdiff \| raw \| diff to current
2009-12-21	westcott	fixed some bugs and added mgcluster command	blob \| commitdiff \| raw \| diff to current

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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