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]> git.donarmstrong.com Git - mothur.git/history - getoturepcommand.cpp

2014-01-09	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw
2014-01-09	Sarah Westcott	added Jensen-Shannon calc. working on get.communitytype...	blob \| commitdiff \| raw
2014-01-08	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2013-11-19	Sarah Westcott	added binary file operations to mothurout class. added...	blob \| commitdiff \| raw \| diff to current
2013-10-08	Sarah Westcott	added otulabels to heatmap.bin. made OTUlabels “smarter...	blob \| commitdiff \| raw \| diff to current
2013-09-04	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2013-08-14	Sarah Westcott	Merge remote-tracking branch 'origin'	blob \| commitdiff \| raw \| diff to current
2013-08-14	Sarah Westcott	changed name of get.metacommunity to get.communitytype...	blob \| commitdiff \| raw \| diff to current
2013-04-22	SarahsWork	added flag to count table read so that commands that...	blob \| commitdiff \| raw \| diff to current
2013-04-05	SarahsWork	added method parameter to get.oturep. options method...	blob \| commitdiff \| raw \| diff to current
2012-12-13	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-12-13	Sarah Westcott	fixed bug in phylo.diversity rooting. added filename...	blob \| commitdiff \| raw \| diff to current
2012-10-22	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-10-22	Sarah Westcott	added sets to amova and homova commands. added oligos...	blob \| commitdiff \| raw \| diff to current
2012-10-22	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-09-25	Sarah Westcott	added count file to get.oturep, pre.cluster, screen...	blob \| commitdiff \| raw \| diff to current
2012-07-30	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-07-27	Sarah Westcott	added sparseDistanceMatrix class. Modified cluster...	blob \| commitdiff \| raw \| diff to current
2012-06-19	Sarah Westcott	added load.logfile command. changed summary.single...	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	Revert to previous commit	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	moved mothur's source into a folder to make grabbing...	blob \| commitdiff \| raw
2012-01-04	westcott	1.23.0	blob \| commitdiff \| raw \| diff to current
2011-10-26	westcott	paralellized chimera.uchime for windows for both by...	blob \| commitdiff \| raw \| diff to current
2011-10-18	westcott	1.22.0	blob \| commitdiff \| raw \| diff to current
2011-08-22	westcott	added multiple processors option for Windows users...	blob \| commitdiff \| raw \| diff to current
2011-07-15	westcott	rewrote metastats command in c++, added mothurRemove...	blob \| commitdiff \| raw \| diff to current
2011-06-14	westcott	working on current change	blob \| commitdiff \| raw \| diff to current
2011-05-10	westcott	added citation function to commands	blob \| commitdiff \| raw \| diff to current
2011-05-09	westcott	1.19.0	blob \| commitdiff \| raw \| diff to current
2011-04-06	westcott	added getCommandInfoCommand for gui	blob \| commitdiff \| raw \| diff to current
2011-04-06	westcott	removed read.dist, read.otu, read.tree and globaldata...	blob \| commitdiff \| raw \| diff to current
2011-03-16	westcott	added set.current and get.current commands and modified...	blob \| commitdiff \| raw \| diff to current
2011-02-08	westcott	added [ERROR] flag if command aborts	blob \| commitdiff \| raw \| diff to current
2010-12-08	westcott	get.oturep ifstream	blob \| commitdiff \| raw \| diff to current
2010-12-08	westcott	get.oturep change and trim.seqs fix	blob \| commitdiff \| raw \| diff to current
2010-12-03	westcott	fixed indicator command bug	blob \| commitdiff \| raw \| diff to current
2010-10-26	westcott	fixes while testing	blob \| commitdiff \| raw \| diff to current
2010-10-15	westcott	added pipeline commands which involved change to comman...	blob \| commitdiff \| raw \| diff to current
2010-08-24	westcott	moved utilities out of mothur.h and into mothurOut...	blob \| commitdiff \| raw \| diff to current
2010-07-30	westcott	changes for 1.12.2	blob \| commitdiff \| raw \| diff to current
2010-07-28	westcott	some bug fixes	blob \| commitdiff \| raw \| diff to current
2010-07-23	westcott	1.12.0	blob \| commitdiff \| raw \| diff to current
2010-07-06	westcott	rechecking in	blob \| commitdiff \| raw \| diff to current
2010-06-28	westcott	added groups option to get.oturep command	blob \| commitdiff \| raw \| diff to current
2010-06-01	westcott	latest version	blob \| commitdiff \| raw \| diff to current
2010-04-30	westcott	made get.oturep more memory efficient by breaking the...	blob \| commitdiff \| raw \| diff to current
2010-04-26	westcott	made classifier faster	blob \| commitdiff \| raw \| diff to current
2010-03-03	westcott	added checks for ^C to quit command instead of program	blob \| commitdiff \| raw \| diff to current
2010-02-26	westcott	created mothurOut class to handle logfiles	blob \| commitdiff \| raw \| diff to current
2010-01-28	westcott	fixed some bugs found while testing 1.8	blob \| commitdiff \| raw \| diff to current
2010-01-26	westcott	added set.dir command and modified commands to redirect...	blob \| commitdiff \| raw \| diff to current
2010-01-19	westcott	added warning about average neighbor merges around...	blob \| commitdiff \| raw \| diff to current
2010-01-14	westcott	added formatmatrix, formatcolumn, and formatphylip...	blob \| commitdiff \| raw \| diff to current
2010-01-04	westcott	added pca command	blob \| commitdiff \| raw \| diff to current
2009-12-09	westcott	added sorted parameter to get.oturep, added error check...	blob \| commitdiff \| raw \| diff to current
2009-10-29	westcott	added hcluster command and fixed some bugs, namely...	blob \| commitdiff \| raw \| diff to current
2009-09-22	westcott	removed line option	blob \| commitdiff \| raw \| diff to current
2009-09-15	westcott	fixed some issues while testing 1.6	blob \| commitdiff \| raw \| diff to current
2009-08-05	westcott	bugs fixes while testing for 1.5 release	blob \| commitdiff \| raw \| diff to current
2009-06-25	westcott	added logfile feature	blob \| commitdiff \| raw \| diff to current
2009-06-23	westcott	changed how we do "smart" distancing	blob \| commitdiff \| raw \| diff to current
2009-06-21	pschloss	This is v.1.4.0	blob \| commitdiff \| raw \| diff to current
2009-06-18	westcott	fixed some bugs	blob \| commitdiff \| raw \| diff to current
2009-06-15	westcott	fixing minor bugs	blob \| commitdiff \| raw \| diff to current
2009-06-14	pschloss	merged pat's trim seqs edits with sarah's major overhau...	blob \| commitdiff \| raw \| diff to current
2009-06-12	westcott	broke up globaldata and moved error checking and help...	blob \| commitdiff \| raw \| diff to current
2009-06-03	westcott	added get.rabund and get.sabund command and fixed bug...	blob \| commitdiff \| raw \| diff to current
2009-06-02	westcott	added smart distance feature and optimized all commands...	blob \| commitdiff \| raw \| diff to current
2009-05-21	westcott	modified bin.seqs and get.oturep commands to include...	blob \| commitdiff \| raw \| diff to current
2009-04-21	westcott	broke apart read matrix file	blob \| commitdiff \| raw \| diff to current
2009-04-21	westcott	fixed bug with get.oturep and fixed problem with errorc...	blob \| commitdiff \| raw \| diff to current
2009-04-14	westcott	removed "shared" from some of the calculator names...	blob \| commitdiff \| raw \| diff to current
2009-04-06	westcott	added get.oturep command	blob \| commitdiff \| raw \| diff to current

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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