| 2013-04-19 |
SarahsWork | added mothurOutJustToScreen function and changed all... |
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| 2013-02-07 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2013-01-28 |
Sarah Westcott | added checks to make sure windows processes completed... |
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| 2012-12-13 |
Sarah Westcott | Merge remote-tracking branch 'origin/master' |
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| 2012-12-13 |
Sarah Westcott | fixed bug in phylo.diversity rooting. added filename... |
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| 2012-07-30 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2012-06-19 |
Sarah Westcott | added load.logfile command. changed summary.single... |
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| 2012-05-02 |
Sarah Westcott | Revert to previous commit |
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| 2012-05-02 |
Sarah Westcott | moved mothur's source into a folder to make grabbing... |
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| 2012-04-04 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2012-03-27 |
Sarah Westcott | added pcr.seqs command. fixed bug in rarefacftion.singl... |
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| 2012-03-13 |
Sarah Westcott | added unix to ifdefs. minor changes while testing 1... |
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| 2012-03-06 |
Sarah Westcott | changed sffinfo flow default to true. fixed bug in... |
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| 2012-02-21 |
Sarah Westcott | paralellized filter.seqs for windows |
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| 2012-01-04 |
westcott | 1.23.0 |
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| 2011-12-06 |
westcott | metastats in progress |
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| 2011-09-13 |
westcott | working on windows paralellization, added trimOligos... |
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| 2011-07-15 |
westcott | rewrote metastats command in c++, added mothurRemove... |
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| 2011-06-14 |
westcott | working on current change |
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| 2011-05-10 |
westcott | added citation function to commands |
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| 2011-04-26 |
westcott | added current as option is lists of file names, process... |
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| 2011-04-06 |
westcott | added getCommandInfoCommand for gui |
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| 2011-04-06 |
westcott | removed read.dist, read.otu, read.tree and globaldata... |
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| 2011-03-16 |
westcott | added set.current and get.current commands and modified... |
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| 2011-02-08 |
westcott | added [ERROR] flag if command aborts |
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| 2011-01-07 |
westcott | working on chimera change to add trim feature, fixed... |
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| 2010-11-05 |
westcott | cluster.split fix |
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| 2010-10-26 |
westcott | fixes while testing |
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| 2010-10-25 |
westcott | testing 1.14.0 |
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| 2010-10-15 |
westcott | added pipeline commands which involved change to comman... |
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| 2010-10-05 |
westcott | paralellized phylo.diversity |
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| 2010-10-04 |
westcott | paralellized rarefaction.single |
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| 2010-09-21 |
westcott | added mothur executable to cvs |
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| 2010-09-20 |
westcott | changed how we name the make.group groups file, and... |
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| 2010-09-17 |
westcott | bug fixes |
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| 2010-09-03 |
westcott | working on testing |
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| 2010-08-24 |
westcott | moved utilities out of mothur.h and into mothurOut... |
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| 2010-08-23 |
westcott | filter.seqs bug change |
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| 2010-08-23 |
westcott | numSeqs passing fix |
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| 2010-08-20 |
pschloss | fixed filterseqscommand bug where trump wasn't being... |
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| 2010-08-19 |
westcott | changed how we break up the files on parallelized comma... |
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| 2010-08-19 |
westcott | modified calculators to use doubles, added numotu and... |
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| 2010-07-29 |
westcott | 1.12.1 |
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| 2010-07-28 |
westcott | some bug fixes |
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| 2010-07-19 |
westcott | added compile time default path |
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| 2010-07-14 |
westcott | started work on sffinfo command. fixed bug across... |
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| 2010-06-22 |
westcott | added mpi code to cluster.split command |
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| 2010-06-21 |
westcott | added degap.seqs command |
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| 2010-06-15 |
westcott | changed how we count sequences in a fastafile to allow... |
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| 2010-05-20 |
westcott | added cluster.split command |
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| 2010-05-07 |
westcott | changed groupfile in classify.seqs to reflect multiple... |
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| 2010-04-29 |
westcott | paralellized screen.seqs and added mpi code to it.... |
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| 2010-04-20 |
westcott | a few modifications for 1.9 |
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| 2010-04-17 |
westcott | 1.9 |
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| 2010-04-14 |
westcott | some changes while testing 1.9 |
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| 2010-04-07 |
westcott | added MPI code, broke up chimera.seqs into 5 separated... |
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| 2010-03-17 |
westcott | finished mpi for filter.seqs |
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| 2010-03-17 |
westcott | testing |
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| 2010-03-16 |
westcott | modified mpi code to save ram by writing out every... |
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| 2010-03-12 |
westcott | added MPI to dist.seqs command |
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| 2010-03-11 |
westcott | testing mpi |
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| 2010-03-04 |
westcott | changes to filter.seqs |
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| 2010-03-03 |
westcott | added checks for ^C to quit command instead of program |
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| 2010-02-26 |
westcott | filter.seqs can now accept multiple fasta files |
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| 2010-02-26 |
westcott | created mothurOut class to handle logfiles |
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| 2010-01-26 |
westcott | added set.dir command and modified commands to redirect... |
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| 2009-12-02 |
westcott | modified sequence class to read fasta files with commen... |
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| 2009-07-02 |
westcott | made changes to concensus to find a better tree. also... |
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| 2009-06-25 |
westcott | added logfile feature |
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| 2009-06-18 |
westcott | fixed some bugs |
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| 2009-06-14 |
pschloss | merged pat's trim seqs edits with sarah's major overhau... |
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| 2009-06-12 |
westcott | broke up globaldata and moved error checking and help... |
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| 2009-06-06 |
pschloss | added reverse.seqs command |
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| 2009-06-04 |
pschloss | modified filter.seqs to not store all seqs in memory... |
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| 2009-06-04 |
pschloss | *** empty log message *** |
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| 2009-06-04 |
westcott | fixed some bugs |
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| 2009-06-04 |
pschloss | pat's edits of screen.seqs and summary.seqs |
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| 2009-06-03 |
pschloss | addition of summary.seq command [pds] |
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| 2009-05-24 |
pschloss | This contains Pat's bug fixes and updates. It represen... |
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| 2009-05-18 |
westcott | added boneh, efron, and solow calculators |
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| 2009-05-12 |
westcott | added distance command and filterseqs |
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| 2009-05-08 |
westcott | altered venn command to make use of sharedchao for... |
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| 2009-05-08 |
ryabin | filterseqscommand added |
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| 2009-05-04 |
ryabin | *** empty log message *** |
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projects / mothur.git / history