| 2013-02-07 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2013-01-28 |
Sarah Westcott | added checks to make sure windows processes completed... |
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| 2012-12-14 |
Sarah Westcott | added warning to readBlast to warn about duplicate... |
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| 2012-12-13 |
Sarah Westcott | Merge remote-tracking branch 'origin/master' |
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| 2012-12-13 |
Sarah Westcott | fixed bug in phylo.diversity rooting. added filename... |
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| 2012-11-06 |
Sarah Westcott | changed added group output to indicator command. a... |
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| 2012-07-30 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2012-07-03 |
Kathryn Iverson | Merge branch 'master' of https://github.com/mothur... |
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| 2012-06-26 |
Sarah Westcott | Merge remote-tracking branch 'origin/master' |
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| 2012-06-19 |
Sarah Westcott | added phylip as output file type for commands that... |
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| 2012-06-19 |
Sarah Westcott | added load.logfile command. changed summary.single... |
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| 2012-05-02 |
Sarah Westcott | Revert to previous commit |
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| 2012-05-02 |
Sarah Westcott | moved mothur's source into a folder to make grabbing... |
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| 2012-04-04 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2012-03-13 |
Sarah Westcott | added unix to ifdefs. minor changes while testing 1... |
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| 2012-02-20 |
Sarah Westcott | removed unused copy constructors and comments within... |
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| 2012-01-04 |
westcott | 1.23.0 |
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| 2011-10-18 |
westcott | 1.22.0 |
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| 2011-09-13 |
westcott | working on windows paralellization, added trimOligos... |
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| 2011-08-03 |
westcott | added paralellization for windows to dist.seqs and... |
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| 2011-07-15 |
westcott | rewrote metastats command in c++, added mothurRemove... |
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| 2011-06-14 |
westcott | working on current change |
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| 2011-05-24 |
westcott | paralellized seq.error and dist.shared added some error... |
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| 2011-05-10 |
westcott | added citation function to commands |
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| 2011-04-06 |
westcott | added getCommandInfoCommand for gui |
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| 2011-04-06 |
westcott | removed read.dist, read.otu, read.tree and globaldata... |
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| 2011-03-16 |
westcott | added set.current and get.current commands and modified... |
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| 2011-02-08 |
westcott | added [ERROR] flag if command aborts |
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| 2011-01-05 |
westcott | removed various build warnings |
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| 2010-12-31 |
pschloss | added shhh.seqs command |
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| 2010-11-19 |
westcott | added indicator command |
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| 2010-11-08 |
westcott | changes to dist.seqs and pairwise.seqs and cluster... |
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| 2010-11-08 |
westcott | fixed cluster.split bug |
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| 2010-11-05 |
westcott | cluster.split fix |
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| 2010-10-26 |
westcott | fixes while testing |
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| 2010-10-20 |
westcott | added pairwise.seqs |
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| 2010-10-15 |
westcott | added pipeline commands which involved change to comman... |
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| 2010-10-05 |
westcott | paralellized phylo.diversity |
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| 2010-09-17 |
westcott | working on megastats |
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| 2010-09-09 |
westcott | done testing 1.13.0 |
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| 2010-09-01 |
westcott | unifrac parallelization done, changed dist.seqs output... |
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| 2010-08-24 |
westcott | moved utilities out of mothur.h and into mothurOut... |
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| 2010-08-06 |
westcott | added oldfasta and column parameter to dist.seqs so... |
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| 2010-07-28 |
westcott | some bug fixes |
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| 2010-05-20 |
westcott | added cluster.split command |
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| 2010-04-29 |
westcott | paralellized screen.seqs and added mpi code to it.... |
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| 2010-04-27 |
westcott | reworked the classifiers summary file added groupfile... |
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| 2010-04-20 |
westcott | a few modifications for 1.9 |
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| 2010-04-17 |
westcott | 1.9 |
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| 2010-04-14 |
pschloss | pat's minor edits to distance calculations |
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| 2010-04-07 |
westcott | added MPI code, broke up chimera.seqs into 5 separated... |
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| 2010-03-17 |
westcott | finished mpi for filter.seqs |
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| 2010-03-17 |
westcott | testing |
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| 2010-03-16 |
westcott | modified mpi code to save ram by writing out every... |
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| 2010-03-12 |
westcott | added MPI to dist.seqs command |
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| 2010-03-03 |
westcott | added checks for ^C to quit command instead of program |
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| 2010-02-26 |
westcott | created mothurOut class to handle logfiles |
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| 2010-02-23 |
westcott | added warning about merging with something above cutoff... |
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| 2010-01-26 |
westcott | added set.dir command and modified commands to redirect... |
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| 2010-01-12 |
westcott | worked on hcluster. made .single command run using... |
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| 2009-12-23 |
westcott | precluster command finished |
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| 2009-06-25 |
westcott | added logfile feature |
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| 2009-06-21 |
pschloss | This is v.1.4.0 |
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| 2009-06-18 |
westcott | fixed some bugs |
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| 2009-06-14 |
pschloss | merged pat's trim seqs edits with sarah's major overhau... |
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| 2009-06-12 |
westcott | broke up globaldata and moved error checking and help... |
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| 2009-06-08 |
westcott | got rid of extra temp files in dist.seqs |
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| 2009-06-08 |
pschloss | fixed how seq.dists divides the matrix for multiple... |
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| 2009-06-08 |
westcott | dist.seqs can now use n processors, and only outputs... |
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| 2009-06-05 |
westcott | line and label no longer persist between commands.... |
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| 2009-06-04 |
westcott | removed readseqs, readfasta, readnexus, readclustal... |
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| 2009-06-04 |
westcott | fixed some bugs |
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| 2009-06-03 |
pschloss | addition of summary.seq command [pds] |
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| 2009-05-24 |
pschloss | This contains Pat's bug fixes and updates. It represen... |
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| 2009-05-18 |
westcott | added alignment code |
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| 2009-05-15 |
westcott | fixed if defined in dist.seqs command |
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| 2009-05-14 |
westcott | fixed bug in venn command |
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| 2009-05-13 |
westcott | fixed bug with getting sharedrabunds for venn, heatmap... |
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| 2009-05-12 |
westcott | added distance command and filterseqs |
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| 2009-05-08 |
westcott | altered venn command to make use of sharedchao for... |
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projects / mothur.git / history