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]> git.donarmstrong.com Git - mothur.git/history - clustersplitcommand.cpp

2013-09-18	Sarah Westcott	Merge remote-tracking branch 'origin'	blob \| commitdiff \| raw
2013-09-04	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw
2013-09-04	Pat Schloss	random stuff	blob \| commitdiff \| raw
2013-08-14	Sarah Westcott	Merge remote-tracking branch 'origin'	blob \| commitdiff \| raw \| diff to current
2013-07-19	Pat Schloss	Update mgcluster to use dist=1 for missing distances...	blob \| commitdiff \| raw \| diff to current
2013-07-18	Sarah Westcott	added adjust parameter to mgcluster. fixed bug in class...	blob \| commitdiff \| raw \| diff to current
2013-05-23	Abu Zaher Md. Faridee	Merge branch 'master' into dev-ml	blob \| commitdiff \| raw \| diff to current
2013-05-13	Sarah Westcott	cluster.split was not sorting the list file in order...	blob \| commitdiff \| raw \| diff to current
2013-04-22	SarahsWork	added flag to count table read so that commands that...	blob \| commitdiff \| raw \| diff to current
2013-03-18	SarahsWork	Merge remote-tracking branch 'origin'	blob \| commitdiff \| raw \| diff to current
2013-03-18	SarahsWork	working on dereplicate=t issue in chimera.slayer and...	blob \| commitdiff \| raw \| diff to current
2013-02-18	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2013-02-12	Sarah Westcott	added order=A or order=B to trim.flows and shhh.flows...	blob \| commitdiff \| raw \| diff to current
2013-02-07	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2013-02-06	Sarah Westcott	added *.count.summary file to count.groups command...	blob \| commitdiff \| raw \| diff to current
2013-01-16	Sarah Westcott	added topdown parameter to pre.cluster. added more...	blob \| commitdiff \| raw \| diff to current
2013-01-08	Sarah Westcott	added dereplicate parameter to chimera.slayer and chime...	blob \| commitdiff \| raw \| diff to current
2012-12-13	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-12-13	Sarah Westcott	fixed bug in phylo.diversity rooting. added filename...	blob \| commitdiff \| raw \| diff to current
2012-11-06	Sarah Westcott	changed added group output to indicator command. a...	blob \| commitdiff \| raw \| diff to current
2012-10-30	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-10-30	Sarah Westcott	classify.seqs allows sequences to be in taxonomy file...	blob \| commitdiff \| raw \| diff to current
2012-10-22	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-08-06	Sarah Westcott	changes while testing 1.27	blob \| commitdiff \| raw \| diff to current
2012-07-31	Sarah Westcott	added count file to cluster.classic and cluster.split...	blob \| commitdiff \| raw \| diff to current
2012-07-30	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-07-27	Sarah Westcott	added sparseDistanceMatrix class. Modified cluster...	blob \| commitdiff \| raw \| diff to current
2012-06-19	Sarah Westcott	added load.logfile command. changed summary.single...	blob \| commitdiff \| raw \| diff to current
2012-05-31	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-05-16	Kathryn Iverson	Merge branch 'master' of https://github.com/mothur...	blob \| commitdiff \| raw \| diff to current
2012-05-16	Sarah Westcott	added classic parameter to cluster.split. working...	blob \| commitdiff \| raw \| diff to current
2012-05-14	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-05-09	John Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-05-09	Sarah Westcott	cluster.split split method defaults to classify if...	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	Revert to previous commit	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	moved mothur's source into a folder to make grabbing...	blob \| commitdiff \| raw
2012-04-04	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-03-13	Sarah Westcott	added unix to ifdefs. minor changes while testing 1...	blob \| commitdiff \| raw \| diff to current
2012-02-20	Sarah Westcott	removed unused copy constructors and comments within...	blob \| commitdiff \| raw \| diff to current
2012-01-19	westcott	fixed bug with shhh.flow from file path name in write...	blob \| commitdiff \| raw \| diff to current
2012-01-04	westcott	1.23.0	blob \| commitdiff \| raw \| diff to current
2011-11-28	westcott	added fontsize to heatmap.sim, paralellized chimera...	blob \| commitdiff \| raw \| diff to current
2011-10-07	westcott	testing 1.22.0	blob \| commitdiff \| raw \| diff to current
2011-08-22	westcott	added multiple processors option for Windows users...	blob \| commitdiff \| raw \| diff to current
2011-07-15	westcott	rewrote metastats command in c++, added mothurRemove...	blob \| commitdiff \| raw \| diff to current
2011-06-14	westcott	working on current change	blob \| commitdiff \| raw \| diff to current
2011-05-10	westcott	added citation function to commands	blob \| commitdiff \| raw \| diff to current
2011-04-11	westcott	1.18.0	blob \| commitdiff \| raw \| diff to current
2011-04-06	westcott	removed read.dist, read.otu, read.tree and globaldata...	blob \| commitdiff \| raw \| diff to current
2011-03-16	westcott	added set.current and get.current commands and modified...	blob \| commitdiff \| raw \| diff to current
2011-02-08	westcott	added [ERROR] flag if command aborts	blob \| commitdiff \| raw \| diff to current
2011-01-07	westcott	working on chimera change to add trim feature, fixed...	blob \| commitdiff \| raw \| diff to current
2011-01-05	westcott	removed various build warnings	blob \| commitdiff \| raw \| diff to current
2011-01-04	westcott	Changed back to xcode build.	blob \| commitdiff \| raw \| diff to current
2010-11-29	westcott	added consensus.seqs command	blob \| commitdiff \| raw \| diff to current
2010-11-05	westcott	cluster.split fix	blob \| commitdiff \| raw \| diff to current
2010-10-26	westcott	fixes while testing	blob \| commitdiff \| raw \| diff to current
2010-10-15	westcott	added pipeline commands which involved change to comman...	blob \| commitdiff \| raw \| diff to current
2010-09-28	westcott	added distance option to summary.shared	blob \| commitdiff \| raw \| diff to current
2010-09-17	westcott	working on megastats	blob \| commitdiff \| raw \| diff to current
2010-08-24	westcott	moved utilities out of mothur.h and into mothurOut...	blob \| commitdiff \| raw \| diff to current
2010-08-19	westcott	modified calculators to use doubles, added numotu and...	blob \| commitdiff \| raw \| diff to current
2010-07-28	westcott	some bug fixes	blob \| commitdiff \| raw \| diff to current
2010-06-23	westcott	fixed cluster.split with average method	blob \| commitdiff \| raw \| diff to current
2010-06-22	westcott	added mpi code to cluster.split command	blob \| commitdiff \| raw \| diff to current
2010-06-14	westcott	added fasta method to cluster.split	blob \| commitdiff \| raw \| diff to current
2010-06-14	westcott	fixed bug in cluster.split	blob \| commitdiff \| raw \| diff to current
2010-06-11	westcott	fixed bug in cluster.split with classify method	blob \| commitdiff \| raw \| diff to current
2010-06-09	westcott	changes to blastdb to make filenames given to blast...	blob \| commitdiff \| raw \| diff to current
2010-06-04	westcott	sped up splitting of distance file by 2.5 times by...	blob \| commitdiff \| raw \| diff to current
2010-06-03	westcott	fixed cluster.split command	blob \| commitdiff \| raw \| diff to current
2010-05-28	westcott	finished cluster.split adding classify method.	blob \| commitdiff \| raw \| diff to current
2010-05-28	westcott	changed hard parameter in cluster commands	blob \| commitdiff \| raw \| diff to current
2010-05-27	westcott	fixed project	blob \| commitdiff \| raw \| diff to current
2010-05-27	westcott	changes to chop.seqs	blob \| commitdiff \| raw \| diff to current
2010-05-20	westcott	cluster.split command	blob \| commitdiff \| raw \| diff to current
2010-05-20	westcott	fixed phylip convert for cluster.split command	blob \| commitdiff \| raw \| diff to current
2010-05-20	westcott	added cluster.split command	blob \| commitdiff \| raw \| diff to current

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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