git.donarmstrong.com Git - mothur.git/history

]> git.donarmstrong.com Git - mothur.git/history - chimerauchimecommand.cpp

2013-04-22	SarahsWork	added flag to count table read so that commands that...	blob \| commitdiff \| raw
2013-04-01	SarahsWork	added end of file character to some type type reads...	blob \| commitdiff \| raw \| diff to current
2013-03-19	SarahsWork	finished dereplicate changes to chimera commands. ...	blob \| commitdiff \| raw \| diff to current
2013-03-18	SarahsWork	Merge remote-tracking branch 'origin'	blob \| commitdiff \| raw \| diff to current
2013-03-18	SarahsWork	working on dereplicate=t issue in chimera.slayer and...	blob \| commitdiff \| raw \| diff to current
2013-03-12	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2013-03-06	SarahsWork	<= change for anova and homova. finished chimera.uchime...	blob \| commitdiff \| raw \| diff to current
2013-03-05	SarahsWork	Merge remote-tracking branch 'origin'	blob \| commitdiff \| raw \| diff to current
2013-03-05	SarahsWork	working on chimera.uchime change for dereplicate=t...	blob \| commitdiff \| raw \| diff to current
2013-02-07	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2013-01-16	Sarah Westcott	added topdown parameter to pre.cluster. added more...	blob \| commitdiff \| raw \| diff to current
2013-01-08	Sarah Westcott	added dereplicate parameter to chimera.slayer and chime...	blob \| commitdiff \| raw \| diff to current
2012-12-13	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-12-13	Sarah Westcott	fixed bug in phylo.diversity rooting. added filename...	blob \| commitdiff \| raw \| diff to current
2012-10-22	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-10-22	Sarah Westcott	added sets to amova and homova commands. added oligos...	blob \| commitdiff \| raw \| diff to current
2012-10-22	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-10-09	Sarah Westcott	changed dups parameter to dereplicate in chimera.uchime.	blob \| commitdiff \| raw \| diff to current
2012-10-09	Sarah Westcott	added dups parameter to chimera.uchime. working on...	blob \| commitdiff \| raw \| diff to current
2012-08-24	Sarah Westcott	added sff.multiple command. fixed issue with windows...	blob \| commitdiff \| raw \| diff to current
2012-08-14	Sarah Westcott	added code to format fast files for uchime. started...	blob \| commitdiff \| raw \| diff to current
2012-08-13	Sarah Westcott	added count file to chimera.uchime. found issue with...	blob \| commitdiff \| raw \| diff to current
2012-07-30	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-06-19	Sarah Westcott	added load.logfile command. changed summary.single...	blob \| commitdiff \| raw \| diff to current
2012-06-11	Sarah Westcott	fixed bug with dist.shared subsampling. added mode...	blob \| commitdiff \| raw \| diff to current
2012-05-31	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-05-29	Sarah Westcott	added code to check path for uchime and catchall execut...	blob \| commitdiff \| raw \| diff to current
2012-05-14	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-05-11	Sarah Westcott	added some debug stuff to chimera.uchime. optimized...	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	Revert to previous commit	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	moved mothur's source into a folder to make grabbing...	blob \| commitdiff \| raw
2012-05-01	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-04-27	Sarah Westcott	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-04-27	Sarah Westcott	changes while testing.	blob \| commitdiff \| raw \| diff to current
2012-04-04	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-03-27	Sarah Westcott	added pcr.seqs command. fixed bug in rarefacftion.singl...	blob \| commitdiff \| raw \| diff to current
2012-03-13	Sarah Westcott	added unix to ifdefs. minor changes while testing 1...	blob \| commitdiff \| raw \| diff to current
2012-01-04	westcott	1.23.0	blob \| commitdiff \| raw \| diff to current
2011-12-23	westcott	added qvalues to metastats. fixed bug with chimera...	blob \| commitdiff \| raw \| diff to current
2011-11-28	westcott	added fontsize to heatmap.sim, paralellized chimera...	blob \| commitdiff \| raw \| diff to current
2011-11-11	westcott	fixed bug with trim.flows that was adding flow files...	blob \| commitdiff \| raw \| diff to current
2011-11-07	westcott	working on chimera.perseus. made removeConfidences...	blob \| commitdiff \| raw \| diff to current
2011-10-26	westcott	paralellized chimera.uchime for windows for both by...	blob \| commitdiff \| raw \| diff to current
2011-10-24	westcott	added processors to pre.cluster for mac and windows...	blob \| commitdiff \| raw \| diff to current
2011-10-18	westcott	1.22.0	blob \| commitdiff \| raw \| diff to current
2011-09-21	westcott	finished added bygroup processing of chimeras in chimer...	blob \| commitdiff \| raw \| diff to current
2011-09-14	westcott	adds group parameter to chimera.uchime so you can check...	blob \| commitdiff \| raw \| diff to current
2011-07-15	westcott	rewrote metastats command in c++, added mothurRemove...	blob \| commitdiff \| raw \| diff to current
2011-07-06	westcott	added save parameter to align.seqs, chimera commands...	blob \| commitdiff \| raw \| diff to current
2011-06-28	westcott	indicator command	blob \| commitdiff \| raw \| diff to current
2011-06-21	westcott	added cutoff change to hcluster	blob \| commitdiff \| raw \| diff to current
2011-06-21	westcott	descriptions	blob \| commitdiff \| raw \| diff to current
2011-06-17	westcott	1.20.0	blob \| commitdiff \| raw \| diff to current
2011-06-14	westcott	working on current change	blob \| commitdiff \| raw \| diff to current
2011-06-01	westcott	added count.seqs command and made some modifcations...	blob \| commitdiff \| raw \| diff to current
2011-05-18	westcott	fixed bug with trim.seqs allfiles=t	blob \| commitdiff \| raw \| diff to current
2011-05-18	westcott	fixed bug in chimera.uchime	blob \| commitdiff \| raw \| diff to current
2011-05-17	westcott	added parameter to chimera.uchime	blob \| commitdiff \| raw \| diff to current
2011-05-16	westcott	added chimera.uchime	blob \| commitdiff \| raw \| diff to current
2011-05-16	westcott	added chimera.uchime	blob \| commitdiff \| raw \| diff to current
2011-05-16	westcott	added chimera.uchime	blob \| commitdiff \| raw \| diff to current

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

RSS Atom