| 2013-10-08 |
Sarah Westcott | added otulabels to heatmap.bin. made OTUlabels “smarter... |
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| 2013-04-22 |
SarahsWork | added flag to count table read so that commands that... |
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| 2013-04-19 |
SarahsWork | added mothurOutJustToScreen function and changed all... |
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| 2013-04-01 |
SarahsWork | added end of file character to some type type reads... |
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| 2013-03-19 |
SarahsWork | finished dereplicate changes to chimera commands. ... |
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| 2013-03-18 |
SarahsWork | Merge remote-tracking branch 'origin' |
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| 2013-03-18 |
SarahsWork | working on dereplicate=t issue in chimera.slayer and... |
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| 2013-02-07 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2013-01-28 |
Sarah Westcott | added checks to make sure windows processes completed... |
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| 2013-01-08 |
Sarah Westcott | added dereplicate parameter to chimera.slayer and chime... |
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| 2012-12-13 |
Sarah Westcott | Merge remote-tracking branch 'origin/master' |
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| 2012-12-13 |
Sarah Westcott | fixed bug in phylo.diversity rooting. added filename... |
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| 2012-10-22 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2012-08-08 |
Sarah Westcott | added count parameter to chimera.slayer command |
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| 2012-07-30 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2012-06-19 |
Sarah Westcott | added load.logfile command. changed summary.single... |
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| 2012-05-31 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2012-05-23 |
Sarah Westcott | added design and sets parameters to the rarefaction... |
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| 2012-05-02 |
Sarah Westcott | Revert to previous commit |
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| 2012-05-02 |
Sarah Westcott | moved mothur's source into a folder to make grabbing... |
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| 2012-04-04 |
Pat Schloss | Merge remote-tracking branch 'mothur/master' |
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| 2012-03-27 |
Sarah Westcott | added pcr.seqs command. fixed bug in rarefacftion.singl... |
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| 2012-03-13 |
Sarah Westcott | added unix to ifdefs. minor changes while testing 1... |
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| 2012-01-04 |
westcott | 1.23.0 |
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| 2011-11-28 |
westcott | added fontsize to heatmap.sim, paralellized chimera... |
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| 2011-10-18 |
westcott | 1.22.0 |
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| 2011-09-21 |
westcott | finished added bygroup processing of chimeras in chimer... |
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| 2011-09-13 |
westcott | working on windows paralellization, added trimOligos... |
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| 2011-08-22 |
westcott | added multiple processors option for Windows users... |
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| 2011-07-19 |
westcott | added blastlocation to chimera.slayer and fixed issue... |
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| 2011-07-15 |
westcott | rewrote metastats command in c++, added mothurRemove... |
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| 2011-07-06 |
westcott | added save parameter to align.seqs, chimera commands... |
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| 2011-06-14 |
westcott | working on current change |
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| 2011-06-03 |
westcott | fixed bug with blastdb.cpp |
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| 2011-05-31 |
westcott | working on removing pointers from chimera.slayer to... |
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| 2011-05-18 |
westcott | fixed bug in chimera.uchime |
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| 2011-05-10 |
westcott | added citation function to commands |
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| 2011-05-09 |
westcott | 1.19.0 |
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| 2011-05-05 |
pschloss | chimera.slayer debugging |
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| 2011-05-04 |
westcott | changes for chimera slayer |
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| 2011-05-03 |
westcott | changed defaults in slayer to minsnp=10 and realign=t |
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| 2011-04-29 |
westcott | working on chimera.slayer |
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| 2011-04-27 |
pschloss | tracking down chimera.slayer issue |
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| 2011-04-26 |
westcott | added current as option is lists of file names, process... |
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| 2011-04-25 |
westcott | minor bug in chimera maligner |
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| 2011-04-20 |
pschloss | some alterations to chimera.slayer |
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| 2011-04-19 |
westcott | finished chimera.slayer template=self change |
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| 2011-04-18 |
westcott | modified chimera.slayer template=self |
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| 2011-04-08 |
pschloss | a few meaningless changes that are commented out |
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| 2011-04-06 |
westcott | added getCommandInfoCommand for gui |
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| 2011-04-06 |
westcott | removed read.dist, read.otu, read.tree and globaldata... |
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| 2011-04-04 |
westcott | sped up the remove.seqs and remove.lineage and get... |
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| 2011-03-16 |
westcott | added set.current and get.current commands and modified... |
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| 2011-02-15 |
westcott | finished the chimera.slayer split function |
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| 2011-02-14 |
westcott | added make.fastq command |
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| 2011-02-14 |
westcott | fixed catchall PATH variable bug added trimera to chime... |
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| 2011-02-09 |
westcott | added mantel command |
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| 2011-02-08 |
westcott | added [ERROR] flag if command aborts |
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| 2011-02-08 |
westcott | added amova command |
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| 2011-01-07 |
westcott | finished chimera.slayer adding trim parameter, added... |
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| 2011-01-07 |
westcott | working on chimera change to add trim feature, fixed... |
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| 2011-01-04 |
westcott | removed parse.sff command and made its functionality... |
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| 2011-01-03 |
westcott | added template=self capability to chimers.slayer, worke... |
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| 2010-11-05 |
westcott | cluster.split fix |
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| 2010-10-25 |
westcott | testing 1.14.0 |
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| 2010-10-15 |
westcott | added pipeline commands which involved change to comman... |
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| 2010-09-30 |
westcott | added parse.fastaq command, added permute option to... |
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| 2010-09-17 |
westcott | bug fixes |
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| 2010-08-24 |
westcott | moved utilities out of mothur.h and into mothurOut... |
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| 2010-08-23 |
westcott | numSeqs passing fix |
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| 2010-08-19 |
westcott | changed how we break up the files on parallelized comma... |
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| 2010-08-19 |
westcott | modified calculators to use doubles, added numotu and... |
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| 2010-07-29 |
westcott | 1.12.1 |
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| 2010-07-28 |
westcott | some bug fixes |
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| 2010-07-19 |
westcott | added compile time default path |
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| 2010-07-14 |
westcott | started work on sffinfo command. fixed bug across... |
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| 2010-06-24 |
westcott | created blank accnos in chimera commands if no seqs... |
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| 2010-06-21 |
westcott | modified chimera commands to process multiple fasta... |
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| 2010-06-15 |
westcott | changed how we count sequences in a fastafile to allow... |
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| 2010-06-09 |
westcott | changes to blastdb to make filenames given to blast... |
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| 2010-05-20 |
westcott | added cluster.split command |
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| 2010-04-29 |
westcott | paralellized screen.seqs and added mpi code to it.... |
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| 2010-04-26 |
westcott | made classifier faster |
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| 2010-04-20 |
westcott | a few modifications for 1.9 |
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| 2010-04-20 |
westcott | a few modifications for 1.9 |
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| 2010-04-17 |
westcott | 1.9 |
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| 2010-04-14 |
westcott | some changes while testing 1.9 |
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| 2010-04-07 |
westcott | added MPI code, broke up chimera.seqs into 5 separated... |
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projects / mothur.git / history