git.donarmstrong.com Git - mothur.git/history

]> git.donarmstrong.com Git - mothur.git/history - chimeraslayer.cpp

2013-03-18	SarahsWork	Merge remote-tracking branch 'origin'	blob \| commitdiff \| raw
2013-03-18	SarahsWork	working on dereplicate=t issue in chimera.slayer and...	blob \| commitdiff \| raw
2012-05-02	Sarah Westcott	Revert to previous commit	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	moved mothur's source into a folder to make grabbing...	blob \| commitdiff \| raw
2011-11-28	westcott	added fontsize to heatmap.sim, paralellized chimera...	blob \| commitdiff \| raw \| diff to current
2011-10-18	westcott	1.22.0	blob \| commitdiff \| raw \| diff to current
2011-08-22	westcott	added multiple processors option for Windows users...	blob \| commitdiff \| raw \| diff to current
2011-07-19	westcott	added blastlocation to chimera.slayer and fixed issue...	blob \| commitdiff \| raw \| diff to current
2011-07-06	westcott	added save parameter to align.seqs, chimera commands...	blob \| commitdiff \| raw \| diff to current
2011-06-03	westcott	fixed bug with blastdb.cpp	blob \| commitdiff \| raw \| diff to current
2011-06-01	westcott	added count.seqs command and made some modifcations...	blob \| commitdiff \| raw \| diff to current
2011-05-31	westcott	working on removing pointers from chimera.slayer to...	blob \| commitdiff \| raw \| diff to current
2011-05-27	westcott	captured stdout from system command, fixed bug in trim...	blob \| commitdiff \| raw \| diff to current
2011-05-26	westcott	v 19.3	blob \| commitdiff \| raw \| diff to current
2011-05-09	westcott	1.19.0	blob \| commitdiff \| raw \| diff to current
2011-05-08	pschloss	more chimera.slayer debugging	blob \| commitdiff \| raw \| diff to current
2011-05-06	pschloss	added kmer stuff	blob \| commitdiff \| raw \| diff to current
2011-05-06	pschloss	chimera.slayer debugging	blob \| commitdiff \| raw \| diff to current
2011-05-05	pschloss	chimera.slayer debugging	blob \| commitdiff \| raw \| diff to current
2011-05-05	pschloss	chimera.slayer debugging	blob \| commitdiff \| raw \| diff to current
2011-05-05	pschloss	changed tags on temp blast db to include template name	blob \| commitdiff \| raw \| diff to current
2011-05-05	pschloss	changed tags on temp blast db to include template name	blob \| commitdiff \| raw \| diff to current
2011-05-04	westcott	chimera.slayer	blob \| commitdiff \| raw \| diff to current
2011-05-04	westcott	changes for chimera slayer	blob \| commitdiff \| raw \| diff to current
2011-05-04	westcott	changes for chimera slayer	blob \| commitdiff \| raw \| diff to current
2011-05-03	pschloss	incorporation of nast-ier code	blob \| commitdiff \| raw \| diff to current
2011-05-03	westcott	fixed id match	blob \| commitdiff \| raw \| diff to current
2011-05-03	westcott	sped up realign	blob \| commitdiff \| raw \| diff to current
2011-05-03	westcott	fixed bug with realigner for chimera slayer	blob \| commitdiff \| raw \| diff to current
2011-05-03	westcott	fixed bug with realigner for chimera slayer	blob \| commitdiff \| raw \| diff to current
2011-04-29	westcott	working on chimera.slayer	blob \| commitdiff \| raw \| diff to current
2011-04-27	westcott	working on slayer bug	blob \| commitdiff \| raw \| diff to current
2011-04-25	westcott	minor bug in chimera maligner	blob \| commitdiff \| raw \| diff to current
2011-04-19	westcott	finished chimera.slayer template=self change	blob \| commitdiff \| raw \| diff to current
2011-04-18	westcott	modified chimera.slayer template=self	blob \| commitdiff \| raw \| diff to current
2011-04-18	pschloss	tie breaker fix to chimera.slayer	blob \| commitdiff \| raw \| diff to current
2011-03-21	pschloss	random chagnes from pat	blob \| commitdiff \| raw \| diff to current
2011-03-15	westcott	adding current file class	blob \| commitdiff \| raw \| diff to current
2011-02-15	westcott	finished the chimera.slayer split function	blob \| commitdiff \| raw \| diff to current
2011-02-14	westcott	fixed catchall PATH variable bug added trimera to chime...	blob \| commitdiff \| raw \| diff to current
2011-01-07	westcott	finished chimera.slayer adding trim parameter, added...	blob \| commitdiff \| raw \| diff to current
2011-01-07	westcott	working on chimera change to add trim feature, fixed...	blob \| commitdiff \| raw \| diff to current
2011-01-04	westcott	removed parse.sff command and made its functionality...	blob \| commitdiff \| raw \| diff to current
2011-01-03	westcott	added template=self capability to chimers.slayer, worke...	blob \| commitdiff \| raw \| diff to current
2010-12-23	westcott	fixed memory leak in maligner minCoverageFilter functio...	blob \| commitdiff \| raw \| diff to current
2010-09-08	westcott	testing 1.13.0	blob \| commitdiff \| raw \| diff to current
2010-08-24	westcott	moved utilities out of mothur.h and into mothurOut...	blob \| commitdiff \| raw \| diff to current
2010-08-06	westcott	added versioning info to all shortcut files mothur...	blob \| commitdiff \| raw \| diff to current
2010-06-14	westcott	fixed bug in cluster.split	blob \| commitdiff \| raw \| diff to current
2010-06-10	westcott	committing so I can work on the other machine	blob \| commitdiff \| raw \| diff to current
2010-04-20	westcott	a few modifications for 1.9	blob \| commitdiff \| raw \| diff to current
2010-04-17	westcott	1.9	blob \| commitdiff \| raw \| diff to current
2010-04-07	westcott	added MPI code, broke up chimera.seqs into 5 separated...	blob \| commitdiff \| raw \| diff to current
2010-03-03	westcott	added checks for ^C to quit command instead of program	blob \| commitdiff \| raw \| diff to current
2010-02-26	westcott	created mothurOut class to handle logfiles	blob \| commitdiff \| raw \| diff to current
2010-02-23	westcott	added warning about merging with something above cutoff...	blob \| commitdiff \| raw \| diff to current
2010-02-22	westcott	chimeras, fix to sabundvector and sharedsabundvector...	blob \| commitdiff \| raw \| diff to current
2010-02-17	westcott	chimeras	blob \| commitdiff \| raw \| diff to current
2010-02-16	westcott	chimeracode	blob \| commitdiff \| raw \| diff to current
2010-02-12	westcott	working on chimeras	blob \| commitdiff \| raw \| diff to current
2010-02-04	pschloss	pat's ../ bug fix	blob \| commitdiff \| raw \| diff to current
2010-01-26	pschloss	pat's edits from 1/26/2010	blob \| commitdiff \| raw \| diff to current
2009-12-09	westcott	added sorted parameter to get.oturep, added error check...	blob \| commitdiff \| raw \| diff to current
2009-11-25	westcott	a few changes to chimera classes	blob \| commitdiff \| raw \| diff to current
2009-10-12	westcott	finished chimeraslayer method and added get.listcount...	blob \| commitdiff \| raw \| diff to current
2009-09-29	westcott	working on chimeraslayer and found bug in shared command.	blob \| commitdiff \| raw \| diff to current
2009-09-28	westcott	started adding chimeraslayer method and fixed minor...	blob \| commitdiff \| raw \| diff to current

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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