git.donarmstrong.com Git - mothur.git/history

]> git.donarmstrong.com Git - mothur.git/history - bayesian.cpp

2013-07-17	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw
2013-06-13	Sarah Westcott	added make.lefse command. fixed bug in make.contigs...	blob \| commitdiff \| raw
2013-04-26	SarahsWork	added adjustDots function to pcr.seqs, keeps sequences...	blob \| commitdiff \| raw \| diff to current
2013-02-07	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2013-01-16	Sarah Westcott	added topdown parameter to pre.cluster. added more...	blob \| commitdiff \| raw \| diff to current
2012-10-30	Sarah Westcott	Merge remote-tracking branch 'origin/master'	blob \| commitdiff \| raw \| diff to current
2012-10-30	Sarah Westcott	classify.seqs allows sequences to be in taxonomy file...	blob \| commitdiff \| raw \| diff to current
2012-10-22	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-09-12	Sarah Westcott	optimizing classify.seqs calculating of template probab...	blob \| commitdiff \| raw \| diff to current
2012-09-11	Sarah Westcott	added count file to get.groups and remove.groups. added...	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	Revert to previous commit	blob \| commitdiff \| raw \| diff to current
2012-05-02	Sarah Westcott	moved mothur's source into a folder to make grabbing...	blob \| commitdiff \| raw
2012-05-01	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-04-27	Sarah Westcott	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-04-27	Sarah Westcott	changes while testing.	blob \| commitdiff \| raw \| diff to current
2012-04-04	Pat Schloss	Merge remote-tracking branch 'mothur/master'	blob \| commitdiff \| raw \| diff to current
2012-03-13	Sarah Westcott	added unix to ifdefs. minor changes while testing 1...	blob \| commitdiff \| raw \| diff to current
2012-02-20	Sarah Westcott	removed unused copy constructors and comments within...	blob \| commitdiff \| raw \| diff to current
2012-01-19	westcott	fixed bug with shhh.flow from file path name in write...	blob \| commitdiff \| raw \| diff to current
2011-12-23	pschloss	* empty log message *	blob \| commitdiff \| raw \| diff to current
2011-09-13	westcott	working on windows paralellization, added trimOligos...	blob \| commitdiff \| raw \| diff to current
2011-08-22	westcott	added multiple processors option for Windows users...	blob \| commitdiff \| raw \| diff to current
2011-07-15	westcott	rewrote metastats command in c++, added mothurRemove...	blob \| commitdiff \| raw \| diff to current
2011-07-06	westcott	added save parameter to align.seqs, chimera commands...	blob \| commitdiff \| raw \| diff to current
2011-06-13	pschloss	removed some testing changes i made to classify.seqs	blob \| commitdiff \| raw \| diff to current
2011-06-09	pschloss	some of pat's small modifications	blob \| commitdiff \| raw \| diff to current
2011-04-08	pschloss	a few meaningless changes that are commented out	blob \| commitdiff \| raw \| diff to current
2010-12-03	westcott	fixed craig nelsons weighted bug and paralellized parsimony	blob \| commitdiff \| raw \| diff to current
2010-11-22	westcott	finished wrapper for catchall	blob \| commitdiff \| raw \| diff to current
2010-10-15	westcott	added pipeline commands which involved change to comman...	blob \| commitdiff \| raw \| diff to current
2010-08-24	westcott	moved utilities out of mothur.h and into mothurOut...	blob \| commitdiff \| raw \| diff to current
2010-08-06	westcott	added versioning info to all shortcut files mothur...	blob \| commitdiff \| raw \| diff to current
2010-08-05	westcott	fixed bug with creation of .tree.sum file	blob \| commitdiff \| raw \| diff to current
2010-07-29	westcott	1.12.1	blob \| commitdiff \| raw \| diff to current
2010-07-22	westcott	fixes while testing 1.12.0	blob \| commitdiff \| raw \| diff to current
2010-07-14	westcott	started work on sffinfo command. fixed bug across...	blob \| commitdiff \| raw \| diff to current
2010-07-06	westcott	rechecking in	blob \| commitdiff \| raw \| diff to current
2010-06-01	westcott	latest version	blob \| commitdiff \| raw \| diff to current
2010-05-27	westcott	changes to chop.seqs	blob \| commitdiff \| raw \| diff to current
2010-05-20	westcott	added cluster.split command	blob \| commitdiff \| raw \| diff to current
2010-05-14	westcott	1.10.0	blob \| commitdiff \| raw \| diff to current
2010-05-07	westcott	changed confidence scores calculation in bayesian	blob \| commitdiff \| raw \| diff to current
2010-05-04	westcott	fixed bug that caused bayesian cutoff not to work if...	blob \| commitdiff \| raw \| diff to current
2010-04-27	westcott	reworked the classifiers summary file added groupfile...	blob \| commitdiff \| raw \| diff to current
2010-04-26	westcott	made classifier faster	blob \| commitdiff \| raw \| diff to current
2010-04-14	westcott	some changes while testing 1.9	blob \| commitdiff \| raw \| diff to current
2010-03-03	westcott	added checks for ^C to quit command instead of program	blob \| commitdiff \| raw \| diff to current
2010-02-26	westcott	created mothurOut class to handle logfiles	blob \| commitdiff \| raw \| diff to current
2010-01-12	westcott	worked on hcluster. made .single command run using...	blob \| commitdiff \| raw \| diff to current
2010-01-05	westcott	you can now use a distance matrix as input for the...	blob \| commitdiff \| raw \| diff to current
2010-01-04	westcott	added pca command	blob \| commitdiff \| raw \| diff to current
2009-12-09	westcott	added sorted parameter to get.oturep, added error check...	blob \| commitdiff \| raw \| diff to current
2009-11-17	westcott	final fixes for 1.7	blob \| commitdiff \| raw \| diff to current
2009-11-13	westcott	finished work on classify.seqs bayesian method and...	blob \| commitdiff \| raw \| diff to current
2009-11-05	westcott	started work on classify.seqs command. changed the...	blob \| commitdiff \| raw \| diff to current

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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