git.donarmstrong.com Git - mothur.git/history

]> git.donarmstrong.com Git - mothur.git/history - Mothur.xcodeproj

2014-01-09	Sarah Westcott	added Jensen-Shannon calc. working on get.communitytype...	tree \| commitdiff
2013-11-19	Sarah Westcott	added binary file operations to mothurout class. added...	tree \| commitdiff
2013-10-18	Sarah Westcott	modifications to commands to add headers to list file.	tree \| commitdiff
2013-10-17	Sarah Westcott	Merge remote-tracking branch 'origin/master'	tree \| commitdiff
2013-10-17	Sarah Westcott	adding labels to list file.	tree \| commitdiff
2013-10-02	Sarah Westcott	changes while testing	tree \| commitdiff
2013-09-18	Sarah Westcott	Merge remote-tracking branch 'origin'	tree \| commitdiff
2013-09-18	Sarah Westcott	added lefse command. added check for hard filter length...	tree \| commitdiff
2013-09-04	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2013-09-04	Pat Schloss	random stuff	tree \| commitdiff
2013-08-14	Sarah Westcott	Merge remote-tracking branch 'origin'	tree \| commitdiff
2013-08-14	Sarah Westcott	changed name of get.metacommunity to get.communitytype...	tree \| commitdiff
2013-08-02	Sarah Westcott	Merge remote-tracking branch 'origin'	tree \| commitdiff
2013-07-18	Sarah Westcott	added adjust parameter to mgcluster. fixed bug in class...	tree \| commitdiff
2013-07-17	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2013-06-24	Sarah Westcott	Merge remote-tracking branch 'origin'	tree \| commitdiff
2013-06-24	Sarah Westcott	added kruskal.wallis command. added worked on make...	tree \| commitdiff
2013-06-13	Sarah Westcott	added make.lefse command. fixed bug in make.contigs...	tree \| commitdiff
2013-05-29	Sarah Westcott	added rename.seqs command.	tree \| commitdiff
2013-05-28	Sarah Westcott	citation changes for 1.31.0	tree \| commitdiff
2013-05-24	Sarah Westcott	Merge remote-tracking branch 'origin'	tree \| commitdiff
2013-05-23	Abu Zaher Md. Faridee	Merge branch 'master' into dev-ml	tree \| commitdiff
2013-05-15	Sarah Westcott	added make.lookup command.	tree \| commitdiff
2013-05-13	Sarah Westcott	added sparcc command. fixed bug in remove.groups that...	tree \| commitdiff
2013-05-02	Abu Zaher Md. Faridee	a lot of new input parameters in rf module, implemented...	tree \| commitdiff
2013-04-12	SarahsWork	added get.metacommunity command.	tree \| commitdiff
2013-04-01	SarahsWork	added end of file character to some type type reads...	tree \| commitdiff
2013-03-05	SarahsWork	Merge remote-tracking branch 'origin'	tree \| commitdiff
2013-03-02	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2013-02-20	Pat Schloss	updated project file	tree \| commitdiff
2013-02-19	SarahsWork	working on topdown in pre.cluster	tree \| commitdiff
2013-02-18	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2013-02-18	Pat Schloss	update to new version of Xcode	tree \| commitdiff
2013-02-15	SarahsWork	Removed file that shouldn't be tracked	tree \| commitdiff
2013-02-15	SarahsWork	test commit	tree \| commitdiff
2013-02-13	Sarah Westcott	added merge.taxsummary command. added column format...	tree \| commitdiff
2013-02-07	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2013-01-29	Sarah Westcott	added get.dists and remove.dists commands. fixed bug...	tree \| commitdiff
2013-01-25	Sarah Westcott	added primer.design command. fixed bug with linux...	tree \| commitdiff
2013-01-04	Sarah Westcott	Merge remote-tracking branch 'origin/master'	tree \| commitdiff
2013-01-04	Sarah Westcott	added filter.shared command. fixed lci and uci for...	tree \| commitdiff
2013-01-03	Pat Schloss	TEST	tree \| commitdiff
2013-01-03	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2013-01-03	Pat Schloss	test	tree \| commitdiff
2013-01-03	Pat Schloss	test	tree \| commitdiff
2012-12-14	Sarah Westcott	added kruskwalliscommand to Xcode project and fixed...	tree \| commitdiff
2012-12-13	Sarah Westcott	Merge remote-tracking branch 'origin/master'	tree \| commitdiff
2012-12-12	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2012-11-16	Kathryn Iverson	added files for regularized random forest	tree \| commitdiff
2012-11-06	Sarah Westcott	changed added group output to indicator command. a...	tree \| commitdiff
2012-11-02	Sarah Westcott	fix to summary.tax for 1.28.0	tree \| commitdiff
2012-10-30	Sarah Westcott	Merge remote-tracking branch 'origin/master'	tree \| commitdiff
2012-10-30	Sarah Westcott	classify.seqs allows sequences to be in taxonomy file...	tree \| commitdiff
2012-10-26	Kathryn Iverson	added new class forest	tree \| commitdiff
2012-10-22	Sarah Westcott	Merge remote-tracking branch 'origin/master'	tree \| commitdiff
2012-10-22	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2012-10-03	Sarah Westcott	added zap method to classify.seqs and changed bayesian...	tree \| commitdiff
2012-10-02	Sarah Westcott	added classify.shared command and random forest files...	tree \| commitdiff
2012-09-07	Sarah Westcott	major change to the tree class to use the count table...	tree \| commitdiff
2012-08-14	Sarah Westcott	added code to format fast files for uchime. started...	tree \| commitdiff
2012-08-08	Sarah Westcott	added SequenceCountParser class to parse the count...	tree \| commitdiff
2012-07-30	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2012-07-27	Sarah Westcott	added sparseDistanceMatrix class. Modified cluster...	tree \| commitdiff
2012-07-03	Kathryn Iverson	Merge branch 'master' of https://github.com/mothur...	tree \| commitdiff
2012-07-03	Sarah Westcott	changes while testing 1.26	tree \| commitdiff
2012-06-28	Sarah Westcott	added countable class to read and store count file...	tree \| commitdiff
2012-06-19	Sarah Westcott	added load.logfile command. changed summary.single...	tree \| commitdiff
2012-06-07	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2012-06-07	Pat Schloss	dunno	tree \| commitdiff
2012-05-31	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2012-05-21	Sarah Westcott	added get.otulabels and remove.otulabels commands per...	tree \| commitdiff
2012-05-16	Kathryn Iverson	Merge branch 'master' of https://github.com/mothur...	tree \| commitdiff
2012-05-15	Sarah Westcott	added list.labels command. started work on make.contigs...	tree \| commitdiff
2012-05-14	Sarah Westcott	fixed bug in make.biom that occurred if some taxonomies...	tree \| commitdiff
2012-05-14	Sarah Westcott	Merge remote-tracking branch 'origin/master'	tree \| commitdiff
2012-05-14	John Westcott	trying to clean up project files path issues	tree \| commitdiff
2012-05-14	Pat Schloss	fixing pbxproj	tree \| commitdiff
2012-05-14	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2012-05-10	Sarah Westcott	added abundance and sample parameters to get.coremicrob...	tree \| commitdiff
2012-05-09	Sarah Westcott	working on get.coremicrobiom	tree \| commitdiff
2012-05-09	John Westcott	Merge remote-tracking branch 'origin/master'	tree \| commitdiff
2012-05-09	John Westcott	added debug flag to mothurOut. added debug parameter...	tree \| commitdiff
2012-05-02	Sarah Westcott	Revert to previous commit	tree \| commitdiff
2012-05-02	Sarah Westcott	moved mothur's source into a folder to make grabbing...	tree \| commitdiff
2012-05-02	Sarah Westcott	removing chime source files from mother project.	tree \| commitdiff
2012-05-01	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2012-04-27	Sarah Westcott	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2012-04-27	Sarah Westcott	changes while testing.	tree \| commitdiff
2012-04-17	Sarah Westcott	added make.biom command	tree \| commitdiff
2012-04-13	Sarah Westcott	added tree reader class to handle reading trees. Rewor...	tree \| commitdiff
2012-04-10	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2012-04-05	Sarah Westcott	added subsample, tiers and processors to tree.shared...	tree \| commitdiff
2012-04-04	Pat Schloss	Merge remote-tracking branch 'mothur/master'	tree \| commitdiff
2012-04-03	Sarah Westcott	fixed bug in corr.axes so that it now uses the shared...	tree \| commitdiff
2012-04-03	Sarah Westcott	working on adding subsampling to dist.shared. fixed...	tree \| commitdiff
2012-03-28	Sarah Westcott	minor changes to pcr.seqs. Added filterToPos and filte...	tree \| commitdiff
2012-03-27	Sarah Westcott	added pcr.seqs command. fixed bug in rarefacftion.singl...	tree \| commitdiff
2012-03-13	Sarah Westcott	added unix to ifdefs. minor changes while testing 1...	tree \| commitdiff
2012-03-02	Sarah Westcott	added cooccurence command	tree \| commitdiff
2012-02-20	Sarah Westcott	removed unused copy constructors and comments within...	tree \| commitdiff
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Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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